RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SLC6A18Q96N87 628 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 EPHX3Q9H6B9 360 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 SRA1Q9HD15 236 aaKnown RBP16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 TIMMDC1Q9NPL8 285 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 SDR39U1Q9NRG7 319 aaPredicted RBP16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 LRP5O75197 1615 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 MROH6A6NGR9 719 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 SOCS2O14508 198 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 C19orf47Q8N9M1 422 aaKnown RBP16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 NAXEQ8NCW5 288 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR8J1Q8NGP2 316 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 SLC7A11Q9UPY5 501 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 TNRC6CQ9HCJ0 1690 aaKnown RBP16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 TEX13CA0A0J9YWL9 993 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 PCP4L1A6NKN8 68 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 CLDN25C9JDP6 229 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 MALLQ13021 153 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 CBFBQ13951 182 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 TNFRSF10CO14798 259 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 TSTQ16762 297 aaKnown RBP16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 NANOS1Q8WY41 292 aaKnown RBP16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 H0YGG7 62 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 LSM1O15116 133 aaKnown RBP16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 ARF3P61204 181 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 CBLBQ13191 982 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 SCGB3A2Q96PL1 93 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 TTYH2Q9BSA4 534 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 PTPRZ1P23471 2315 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 DCNP07585 359 aaKnown RBP16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 GALK2Q01415 458 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 RGNQ15493 299 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 RADILQ96JH8 1075 aa16.76■□□□□ 0.27
CDC42EP3-201ENST00000295324 HSPA12AO43301 675 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 GPR75O95800 540 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 SDC1P18827 310 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 S100A1P23297 94 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 GGT2P36268 569 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 TMEM184AQ6ZMB5 413 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 UEVLDQ8IX04 471 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 KCMF1Q9P0J7 381 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 SEC14L4Q9UDX3 406 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 TMEM265A0A087WTH1 108 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 ABCB7O75027 752 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 UGT2B7P16662 529 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 PSMB5P28074 263 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 RBPJQ06330 500 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 POU4F2Q12837 409 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 ZNF534Q76KX8 674 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 ARMC10Q8N2F6 343 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 PPP1R14BQ96C90 147 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 SLC22A31A6NKX4 558 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 ANKRD28O15084 1053 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 RRADP55042 308 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 E2F1Q01094 437 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 SEMA3BQ13214 749 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 MFSD9Q8NBP5 474 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 NLGN4YQ8NFZ3 816 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR13H1Q8NG92 308 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR2T4Q8NH00 348 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 MACROD1Q9BQ69 325 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 GPN2Q9H9Y4 310 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 WASF3Q9UPY6 502 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR2T1O43869 369 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 PNMTP11086 282 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 VASPP50552 380 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 MLLT10P55197 1068 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 DCAF7P61962 342 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 HSD11B2P80365 405 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 GAS6Q14393 721 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 ZNF619Q8N2I2 560 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 PGAM5Q96HS1 289 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 ATOH8Q96SQ7 321 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 NXT1Q9UKK6 140 aaKnown RBP16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 HTRA2O43464 458 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 LDB3O75112 727 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 ASB18Q6ZVZ8 466 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 NENFQ9UMX5 172 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 CDH10Q9Y6N8 788 aa16.75■□□□□ 0.27
CDC42EP3-201ENST00000295324 FAM172BPA6NC97 362 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 ACPPP15309 386 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 CRISP1P54107 249 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 KIAA1024LP59773 190 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 ZNF595Q8IYB9 648 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR9A4Q8NGU2 314 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 CUEDC1Q9NWM3 386 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 MALT1Q9UDY8 824 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 CPNE6O95741 557 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 FUT4P22083 530 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 MEP1AQ16819 746 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 EEF1A1P5Q5VTE0 462 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 FAM180BQ6P0A1 224 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 TXLNGYQ9BZA5 131 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 C1GALT1Q9NS00 363 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 PCDH10Q9P2E7 1040 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 KLHL21Q9UJP4 597 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 SLC6A14Q9UN76 642 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 H0YJX3 145 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 RRP8O43159 456 aaKnown RBP16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 HPRP00739 348 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 MRPL3P09001 348 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms