RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ST13P4Q8IZP2 240 aaPredicted RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 THEM5Q8N1Q8 247 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 PAPD5Q8NDF8 572 aaKnown RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 OR4N2Q8NGD1 307 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 UBA3Q8TBC4 463 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 XAGE5Q8WWM1 108 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SEPT8Q92599 483 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 AKAP1Q92667 903 aaKnown RBP eCLIP4.23□□□□□ -1.73
CD44-202ENST00000278385 GLG1Q92896 1179 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 FBXL8Q96CD0 374 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 FAM122AQ96E09 287 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 STAMBPL1Q96FJ0 436 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 ZC3HAV1LQ96H79 300 aaKnown RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 TSNARE1Q96NA8 513 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 DUX5Q96PT3 197 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 OR6C1Q96RD1 312 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 TGS1Q96RS0 853 aaKnown RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 CBWD1Q9BRT8 395 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 TMEM175Q9BSA9 504 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 IFT27Q9BW83 186 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 ZMYND12Q9H0C1 365 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SNX25Q9H3E2 840 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 CDH20Q9HBT6 801 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 RAB9BQ9NP90 201 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SLC9A2Q9UBY0 812 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 GGA2Q9UJY4 613 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 ST3GAL5Q9UNP4 418 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 ERVK-11Q9UQG0 969 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SH2B3Q9UQQ2 575 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 PIGLQ9Y2B2 252 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 WNT6Q9Y6F9 365 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 ZNFX1Q9P2E3 1918 aaKnown RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 SMCHD1A6NHR9 2005 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 TNRC18O15417 2968 aaPredicted RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 A0A0U1RQF3 1178 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 IQANK1A0A1B0GTG1 560 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 A1L4Q6 167 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 TRPC5OSA6NMA1 111 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 SNTNA6NMZ2 147 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 C9JVG2 144 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 MS4A18H0YCH9 400 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 VCYO14598 125 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 XRCC3O43542 346 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 TRAPPC3O43617 180 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 TMPRSS11DO60235 418 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 RBBP9O75884 186 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 DEXIO95424 95 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 LCA5LO95447 670 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 GOT2P00505 430 aaKnown RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 CHRNGP07510 517 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 SFTPBP07988 381 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 RFPL3SP0C7P2 107 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 EPCAMP16422 314 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 SRD5A1P18405 259 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 IL32P24001 234 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 NDUFS1P28331 727 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 NAA10P41227 235 aaPredicted RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 MAGEA11P43364 429 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 SLC6A8P48029 635 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 CLCN5P51795 746 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 MAPK12P53778 367 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 NANOS3P60323 173 aaKnown RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 WDR5P61964 334 aaKnown RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 SP4Q02446 784 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 PLOD1Q02809 727 aaPredicted RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 LRRC63Q05C16 580 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 ITGB3BPQ13352 177 aaPredicted RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 MSLNQ13421 630 aaPredicted RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 C2orf68Q2NKX9 166 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 DCAF4L1Q3SXM0 396 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 MOGAT2Q3SYC2 334 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 PLK5Q496M5 336 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 AGKQ53H12 422 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 CMPK2Q5EBM0 449 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 SAPCD1Q5SSQ6 148 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 HHATQ5VTY9 493 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 TMEM225Q6GV28 225 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 ZNF517Q6ZMY9 492 aaPredicted RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 TPRG1Q6ZUI0 275 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 CCDC190Q86UF4 302 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 PLA2G4DQ86XP0 818 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 CBWD2Q8IUF1 395 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 FAM86B1Q8N7N1 296 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 GJC3Q8NFK1 279 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 VANGL1Q8TAA9 524 aaPredicted RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 HM13Q8TCT9 377 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 CRYGNQ8WXF5 182 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 PIGCQ92535 297 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 SUSD6Q92537 303 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 SNAPC3Q92966 411 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 P2RX5Q93086 422 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 RFT1Q96AA3 541 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 MRGPRFQ96AM1 343 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 PINX1Q96BK5 328 aaKnown RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 LMLNQ96KR4 655 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 GPR137Q96N19 417 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 VPS35Q96QK1 796 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 CCT8L2Q96SF2 557 aa4.22□□□□□ -1.73
CD44-202ENST00000278385 FRMD8Q9BZ67 464 aaPredicted RBP4.22□□□□□ -1.73
CD44-202ENST00000278385 SLC39A8Q9C0K1 460 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms