RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CBSLP0DN79 551 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 NR2F6P10588 404 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 ENDOUP21128 410 aaKnown RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 CBSP35520 551 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 CCR2P41597 374 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 GZMKP49863 264 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 TAP2Q03519 686 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 CHRNEQ04844 493 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 SLC3A1Q07837 685 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 ARL9Q6T311 187 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 SAMD12Q8N8I0 201 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 SPRYD4Q8WW59 207 aaPredicted RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 DNAJA3Q96EY1 480 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 C3orf14Q9HBI5 128 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 MGAT4AQ9UM21 535 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 GRIP1Q9Y3R0 1128 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 PSMD9O00233 223 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 TP53P04637 393 aaPredicted RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 SELPP16109 830 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 SLC9A3P48764 834 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 PCBP3P57721 371 aaKnown RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 DUSP2Q05923 314 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 TOR2AQ5JU69 321 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 SLC8B1Q6J4K2 584 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 TTC23LQ6PF05 361 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 C19orf48Q6RUI8 117 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 PGBD3Q8N328 593 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 ANKRD53Q8N9V6 530 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 CYB561A3Q8NBI2 242 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 VN1R2Q8NFZ6 395 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 OR8J1Q8NGP2 316 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 C9orf43Q8TAL5 461 aaPredicted RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 SECISBP2Q96T21 854 aaKnown RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 NKX3-1Q99801 234 aaPredicted RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 PTGFRNQ9P2B2 879 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 HEATR5BQ9P2D3 2071 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 A0A0A6YYJ9 748 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 NPIPA5A0A0B4J1W7 369 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 AGAP14A8MT82 685 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 NPIPA7E9PJI5 369 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 GNB5O14775 395 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 SLC30A4O14863 429 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 MMP20O60882 483 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 C1orf105O95561 183 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 RAB36O95755 333 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 PROS1P07225 676 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 LIMS3P0CW19 117 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 LIMS4P0CW20 117 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 NPIPA8P0DM63 369 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 CLUP10909 449 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 SHC1P29353 583 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 VIPR1P32241 457 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 CCT3P49368 545 aaKnown RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 RPS7P62081 194 aaKnown RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 FAM71E1Q6IPT2 247 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 FAAP20Q6NZ36 180 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 CHMP1BQ7LBR1 199 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 ADGRD2Q7Z7M1 963 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 NKAIN4Q8IVV8 208 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 RDH10Q8IZV5 341 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 CEP76Q8TAP6 659 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 WDR89Q96FK6 387 aaPredicted RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 FOPNLQ96NB1 174 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 SLC46A2Q9BY10 475 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 OSGEPL1Q9H4B0 414 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 DDX31Q9H8H2 851 aaKnown RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 MRPL17Q9NRX2 175 aaKnown RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 DKK3Q9UBP4 350 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 LSM7Q9UK45 103 aaKnown RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 FBXL4Q9UKA2 621 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 A4GNTQ9UNA3 340 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 A3GALT2U3KPV4 340 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 TCF20Q9UGU0 1960 aaKnown RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 CENPBD1B2RD01 187 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 LEFTY2O00292 366 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 TSPAN4O14817 238 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 ATG13O75143 517 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 ITGB8P26012 769 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 MLLT3P42568 568 aaPredicted RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 WNT4P56705 351 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 SNRPNP63162 240 aaKnown RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 RHAGQ02094 409 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 ASAH1Q13510 395 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 ZNF630Q2M218 657 aaPredicted RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 LYPLAL1Q5VWZ2 237 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 XKRXQ6PP77 449 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 ZNF730Q6ZMV8 503 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 NPAS4Q8IUM7 802 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 ABCG5Q9H222 651 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 THSD1Q9NS62 852 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 CNOT2Q9NZN8 540 aaKnown RBP12.23□□□□□ -0.45
SNX1-201ENST00000261889 INSL5Q9Y5Q6 135 aa12.23□□□□□ -0.45
SNX1-201ENST00000261889 E9PI62 339 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 EPPINO95925 133 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 PRPH2P23942 346 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 MTNR1AP48039 350 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 ID2Q02363 134 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 RPA4Q13156 261 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 MLIPQ5VWP3 458 aa12.22□□□□□ -0.45
SNX1-201ENST00000261889 TMEM107Q6UX40 140 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms