RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 NME2P22392 152 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 PRIM2P49643 509 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 ST13P50502 369 aaKnown RBP17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 CDK9P50750 372 aaKnown RBP17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 MRPS22P82650 360 aaKnown RBP17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 PLCXD2Q0VAA5 305 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 COLEC12Q5KU26 742 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 TMEM198Q66K66 360 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 TMEM64Q6YI46 380 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 GALNTL5Q7Z4T8 443 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 CISD2Q8N5K1 135 aaKnown RBP17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 BCORP1Q8N888 145 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 CDRT4Q8N9R6 151 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 POGLUT1Q8NBL1 392 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 PSD4Q8NDX1 1056 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 PSMA8Q8TAA3 256 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 VSTM2LQ96N03 204 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 EBF4Q9BQW3 602 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 RABEP2Q9H5N1 569 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 Q9N2J8 555 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 SDR39U1Q9NRG7 319 aaPredicted RBP17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 ZCCHC3Q9NUD5 404 aaKnown RBP17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 CNIH4Q9P003 139 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 NTMQ9P121 344 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 DCTN4Q9UJW0 460 aa17.3■□□□□ 0.36
CYSTM1-201ENST00000261811 TO15178 435 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 ABCB7O75027 752 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 NADKO95544 446 aaPredicted RBP17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 PGRP06401 933 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 EFNA1P20827 205 aaPredicted RBP17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 ABCD3P28288 659 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 SOX18P35713 384 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 CCT3P49368 545 aaKnown RBP17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 PSMD4P55036 377 aaKnown RBP17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 TLE1Q04724 770 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 DUSP8Q13202 625 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 TP53BP2Q13625 1128 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 NTRK2Q16620 822 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 ZNF791Q3KP31 576 aaPredicted RBP17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 CYP27C1Q4G0S4 372 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 SPANXN4Q5MJ08 99 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 TBCELQ5QJ74 424 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 SLC44A2Q8IWA5 706 aaPredicted RBP17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 SLC34A3Q8N130 599 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 TRIML2Q8N7C3 387 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 SIMC1Q8NDZ2 872 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 OR4A15Q8NGL6 344 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 SFXN5Q8TD22 340 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 THOC1Q96FV9 657 aaKnown RBP17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 MARK4Q96L34 752 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 OR52E6Q96RD3 313 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 SECISBP2Q96T21 854 aaKnown RBP17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 RMND5AQ9H871 391 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 FGFR1OP2Q9NVK5 253 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 TMEM45AQ9NWC5 275 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 DTX4Q9Y2E6 619 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 CFAP46Q8IYW2 2715 aa17.29■□□□□ 0.36
CYSTM1-201ENST00000261811 PPM1BO75688 479 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 PSMG1O95456 288 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 IL12BP29460 328 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 SOAT1P35610 550 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 MLLT10P55197 1068 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 NNATQ16517 81 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 METTL21CQ5VZV1 264 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 GK5Q6ZS86 529 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 NUP54Q7Z3B4 507 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 ATCAYQ86WG3 371 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 SNRNP40Q96DI7 357 aaKnown RBP17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 FAM120BQ96EK7 910 aaKnown RBP17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 LMF2Q9BU23 707 aaKnown RBP17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 EQTNQ9NQ60 294 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 FAF1Q9UNN5 650 aaPredicted RBP17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 PCDHGB3Q9Y5G1 929 aa17.28■□□□□ 0.36
CYSTM1-201ENST00000261811 PEX1O43933 1283 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 REM1O75628 298 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 KCNH1O95259 989 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 CPSF4O95639 269 aaKnown RBP17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 CT45A8P0DMV1 189 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 CT45A9P0DMV2 189 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 NCF2P19878 526 aaPredicted RBP17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 CNR1P21554 472 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 MRPL19P49406 292 aaKnown RBP17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 ATP4BP51164 291 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 POLR2JP52435 117 aaKnown RBP17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 KCNK10P57789 538 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 HBA1P69905 142 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 EFR3AQ14156 821 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 DECR1Q16698 335 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 CT45A2Q5DJT8 189 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 MSANTD1Q6ZTZ1 278 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 MDGA2Q7Z553 956 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 ZNF227Q86WZ6 799 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 OR5M3Q8NGP4 307 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 GPR151Q8TDV0 419 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 PAQR8Q8TEZ7 354 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 TMCO6Q96DC7 493 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 OMA1Q96E52 524 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 CHMP6Q96FZ7 201 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 FAM173AQ9BQD7 235 aa17.27■□□□□ 0.36
CYSTM1-201ENST00000261811 BTNL2Q9UIR0 455 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms