RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ZNF559Q9BR84 538 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 ST6GALNAC5Q9BVH7 336 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 SPHK2Q9NRA0 654 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 ATP4BP51164 291 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 IDH3GP51553 393 aaPredicted RBP13.6□□□□□ -0.23
CUX2-201ENST00000261726 SHC2P98077 582 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 NSDHLQ15738 373 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 ELP2Q6IA86 826 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 IGDCC3Q8IVU1 814 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 SAMD11Q96NU1 681 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 PEBP4Q96S96 227 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 RBM24Q9BX46 236 aaKnown RBP13.6□□□□□ -0.23
CUX2-201ENST00000261726 SLC22A31A6NKX4 558 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 A6NL46 340 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 C12orf76Q8N812 135 aaPredicted RBP13.6□□□□□ -0.23
CUX2-201ENST00000261726 PMM2O15305 246 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 RASAL1O95294 804 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 RHOP08100 348 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 PORP16435 677 aaPredicted RBP13.6□□□□□ -0.23
CUX2-201ENST00000261726 SFTPDP35247 375 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 UGT3A2Q3SY77 523 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 RELL1Q8IUW5 271 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 UEVLDQ8IX04 471 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 ZNF461Q8TAF7 563 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 HS6ST2Q96MM7 605 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 OR14A2Q96R54 314 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 ACTR6Q9GZN1 396 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 TMEM9Q9P0T7 183 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 SLC1A7O00341 560 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 LAMTOR5O43504 91 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 SYT7O43581 403 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 PTPN6P29350 595 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 HTR2BP41595 481 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 GPR17Q13304 367 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 COMMD7Q86VX2 200 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 OR5AK2Q8NH90 309 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 NTPCRQ9BSD7 190 aaKnown RBP13.6□□□□□ -0.23
CUX2-201ENST00000261726 FAM86C1Q9NVL1 165 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 IRS2Q9Y4H2 1338 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 SOD2P04179 222 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 AGTR1P30556 359 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 HTD2P86397 168 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 FADDQ13158 208 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 SPATS1Q496A3 300 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 BORAQ6PGQ7 559 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 OR5L2Q8NGL0 311 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 DCUN1D4Q92564 292 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 PNMTP11086 282 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 CX3CR1P49238 355 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 ZNF572Q7Z3I7 529 aaPredicted RBP13.59□□□□□ -0.23
CUX2-201ENST00000261726 ZNF610Q8N9Z0 462 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 OR7G2Q8NG99 324 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 SYT17Q9BSW7 474 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 NXF5Q9H1B4 397 aaKnown RBP13.59□□□□□ -0.23
CUX2-201ENST00000261726 COQ4Q9Y3A0 265 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 CD1DP15813 335 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 DEFB110Q30KQ9 67 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 ZFAND4Q86XD8 727 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 PDZD9Q8IXQ8 264 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 ANKK1Q8NFD2 765 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 OR1S1Q8NH92 325 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 FAM71F1Q96KD3 344 aaPredicted RBP13.59□□□□□ -0.23
CUX2-201ENST00000261726 RLIMQ9NVW2 624 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 TP53TG5Q9Y2B4 290 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 ANKRD34BA5PLL1 514 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 LATO43561 262 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 PPP1R3DO95685 299 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 STK11Q15831 433 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 TMEM173Q86WV6 379 aaPredicted RBP13.59□□□□□ -0.23
CUX2-201ENST00000261726 NANOS1Q8WY41 292 aaKnown RBP13.59□□□□□ -0.23
CUX2-201ENST00000261726 MGLLQ99685 303 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 GPR83Q9NYM4 423 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 COQ3Q9NZJ6 369 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 RARRES3Q9UL19 164 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 KIAA0355O15063 1070 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 LCATP04180 440 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 DRD5P21918 477 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 STT3AP46977 705 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 CTXN1P60606 82 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 NFATC4Q14934 902 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 SPHARQ15513 63 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 GTPBP8Q8N3Z3 284 aaPredicted RBP13.59□□□□□ -0.23
CUX2-201ENST00000261726 ACBD4Q8NC06 268 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 SORCS1Q8WY21 1168 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 SYT3Q9BQG1 590 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 TMEM45AQ9NWC5 275 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 FAM118AQ9NWS6 357 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 OR1A2Q9Y585 309 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 WDPCPO95876 746 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 RHCEP18577 417 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 RAB3BP20337 219 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 PGGT1BP53609 377 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 TMBIM6P55061 237 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 MAP4K2Q12851 820 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 IER5LQ5T953 404 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 MAF1Q9H063 256 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 POPDC3Q9HBV1 291 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 LIPT1Q9Y234 373 aa13.59□□□□□ -0.23
CUX2-201ENST00000261726 STRCQ7RTU9 1775 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms