RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SLC30A8Q8IWU4 369 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 CHAC2Q8WUX2 184 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 SLC25A46Q96AG3 418 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 ZG16BQ96DA0 208 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 DTD2Q96FN9 168 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 GIMAP4Q9NUV9 329 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 NDUFB11Q9NX14 153 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 SLC23A2Q9UGH3 650 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 FBXW2Q9UKT8 454 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 GSTK1Q9Y2Q3 226 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 GRIP1Q9Y3R0 1128 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 PRAMEF27A3QJZ7 478 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 MSL3P1P0C860 447 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 KIR2DL3P43628 341 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 ZNF791Q3KP31 576 aaPredicted RBP13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 SLC30A6Q6NXT4 461 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 ZNF438Q7Z4V0 828 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 CADM2Q8N3J6 435 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 Q8N402 240 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 PLA2G15Q8NCC3 412 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 TEX47Q8TBZ9 253 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 NXPE3Q969Y0 559 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 COL26A1Q96A83 441 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 C16orf58Q96GQ5 468 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 SERHL2Q9H4I8 314 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 NDRG2Q9UN36 371 aaKnown RBP13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 A4GNTQ9UNA3 340 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 HEATR5BQ9P2D3 2071 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 CACNA1CQ13936 2221 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 CD8B2A6NJW9 211 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 B4DXG7 233 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 CD8BP10966 210 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 SLC9A3P48764 834 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 TEKQ02763 1124 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 HYAL2Q12891 473 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 ELOAQ14241 798 aaKnown RBP13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 CDK10Q15131 360 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 SAXO2Q658L1 398 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 YAF2Q8IY57 180 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 SLC7A6Q92536 515 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 MRGPRX3Q96LB0 322 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 KATNB1Q9BVA0 655 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 P2RX2Q9UBL9 471 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 KCND3Q9UK17 655 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 MN1Q10571 1320 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 A0A1W2PS29 197 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 A8MVJ9 347 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 LCMT2O60294 686 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 HNRNPA1P09651 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 RAB8AP61006 207 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 TFF2Q03403 129 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 FLYWCH1Q4VC44 716 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 CNIH2Q6PI25 160 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 ZNF730Q6ZMV8 503 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 AMZ2Q86W34 360 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 MARCH9Q86YJ5 346 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 TP53INP1Q96A56 240 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 FAM46AQ96IP4 442 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 ASB16Q96NS5 453 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 SNX18Q96RF0 628 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 SAP130Q9H0E3 1048 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 TRPV5Q9NQA5 729 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 PLEKHB1Q9UF11 243 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 NTNG1Q9Y2I2 539 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 ARID1BQ8NFD5 2236 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 HMX3A6NHT5 357 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 PCCBP05166 539 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 PIPP12273 146 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 CLCNKAP51800 687 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 SLC16A1P53985 500 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 WNT4P56705 351 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 SMIM11AP58511 58 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 FABP5Q01469 135 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 KRT33BQ14525 404 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 C2orf27AQ580R0 203 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 C9orf64Q5T6V5 341 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 C12orf73Q69YU5 71 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 GDPGP1Q6ZNW5 385 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 NOXA1Q86UR1 476 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 SETD6Q8TBK2 473 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 KAT2AQ92830 837 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 SMARCD2Q92925 531 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 WACQ9BTA9 647 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 DPH7Q9BTV6 452 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 RNF121Q9H920 327 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 CLEC4AQ9UMR7 237 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 TRAPPC4Q9Y296 219 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 ALPK2Q86TB3 2170 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 DSPPQ9NZW4 1301 aa13.63□□□□□ -0.23
SFSWAP-201ENST00000261674 FAM183AA6NL82 134 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 MTNR1AP48039 350 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 ZNF77Q15935 545 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 NDUFAF5Q5TEU4 345 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 ANKRD54Q6NXT1 300 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 ASB18Q6ZVZ8 466 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 UFD1Q92890 307 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 ARSGQ96EG1 525 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 HDHD2Q9H0R4 259 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 GLIPR2Q9H4G4 154 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 NEUROD4Q9HD90 331 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms