RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 C12orf40Q86WS4 652 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 OR4N5Q8IXE1 308 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 KRT78Q8N1N4 520 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 ANKK1Q8NFD2 765 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 UPRTQ96BW1 309 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 NUS1Q96E22 293 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 TEFMQ96QE5 360 aaKnown RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 SNX18Q96RF0 628 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 LGR4Q9BXB1 951 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 NKIRAS2Q9NYR9 191 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 SLC9A8Q9Y2E8 581 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 GSTK1Q9Y2Q3 226 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 OR1A2Q9Y585 309 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 A0A0G2JMP0 313 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 REM1O75628 298 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 OLFM2O95897 454 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 TBX6O95947 436 aaPredicted RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 CPN2P22792 545 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 UQCRC1P31930 480 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 CEP78Q5JTW2 689 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 NDUFAF5Q5TEU4 345 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 FAM129CQ86XR2 697 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 TMC8Q8IU68 726 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 TMEM145Q8NBT3 493 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 SIMC1Q8NDZ2 872 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 OR4M2Q8NGB6 313 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 GOT1L1Q8NHS2 421 aaPredicted RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 GRPEL2Q8TAA5 225 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 TIFAQ96CG3 184 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 ZNF689Q96CS4 500 aaPredicted RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 GLIPR2Q9H4G4 154 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 KCNK6Q9Y257 313 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 GRIP1Q9Y3R0 1128 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 TRPM6Q9BX84 2022 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 REV3LO60673 3130 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 ZSCAN5BA6NJL1 495 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 GTPBP1O00178 669 aaKnown RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 ARHGEF9O43307 516 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 MMP12P39900 470 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 DUSP2Q05923 314 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 MRPL28Q13084 256 aaKnown RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 PDE7AQ13946 482 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 LTB4RQ15722 352 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 GLYR1Q49A26 553 aaPredicted RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 BCL2L15Q5TBC7 163 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 NKAIN4Q8IVV8 208 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 SLC37A3Q8NCC5 494 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 OR8H1Q8NGG4 311 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 OR5H6Q8NGV6 325 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 SPRYD4Q8WW59 207 aaPredicted RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 NXPE3Q969Y0 559 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 ZDHHC5Q9C0B5 715 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 C6orf106Q9H6K1 298 aaPredicted RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 ISG20L2Q9H9L3 353 aaKnown RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 SIRT3Q9NTG7 399 aaPredicted RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 AHSPQ9NZD4 102 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 MAT2BQ9NZL9 334 aa12.46□□□□□ -0.41
PGBD1-201ENST00000259883 MRPL15Q9P015 296 aaKnown RBP12.46□□□□□ -0.41
PGBD1-201ENST00000259883 A0A087WUU8 490 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 A0A0B4J203 849 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 OR52A4PA6NMU1 304 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 H3BSH0 61 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 RGS13O14921 159 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 ERI3O43414 337 aaKnown RBP12.46□□□□□ -0.42
PGBD1-201ENST00000259883 TOXO94900 526 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 PCDH8O95206 1070 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 ACP5P13686 325 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 VIPR2P41587 438 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 C18orf63Q68DL7 685 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 XKRXQ6PP77 449 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 ARL9Q6T311 187 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 RFPL4BQ6ZWI9 263 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.42
PGBD1-201ENST00000259883 CPXM2Q8N436 756 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 ZNF614Q8N883 585 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 PIGKQ92643 395 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 RELTQ969Z4 430 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 NEURL3Q96EH8 262 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 ZFP3Q96NJ6 502 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 OR51V1Q9H2C8 321 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 DDX31Q9H8H2 851 aaKnown RBP12.46□□□□□ -0.42
PGBD1-201ENST00000259883 P2RX2Q9UBL9 471 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 EXTL2Q9UBQ6 330 aa12.46□□□□□ -0.42
PGBD1-201ENST00000259883 TCF20Q9UGU0 1960 aaKnown RBP12.45□□□□□ -0.42
PGBD1-201ENST00000259883 NPIPA5A0A0B4J1W7 369 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 A0A1W2PQ72 361 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 NPIPA7E9PJI5 369 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 LYRM1O43325 122 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 PI15O43692 258 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 NARSO43776 548 aaKnown RBP12.45□□□□□ -0.42
PGBD1-201ENST00000259883 LANCL1O43813 399 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 SERPINI2O75830 405 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 LATS1O95835 1130 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 NPIPA8P0DM63 369 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 SNRPGP62308 76 aaKnown RBP12.45□□□□□ -0.42
PGBD1-201ENST00000259883 SLC7A9P82251 487 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 CHRNEQ04844 493 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 SLC3A1Q07837 685 aa12.45□□□□□ -0.42
PGBD1-201ENST00000259883 CCNJQ5T5M9 372 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms