RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CWF19L1Q69YN2 538 aaKnown RBP12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 RNF148Q8N7C7 305 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 OR10H4Q8NGA5 316 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 ECHDC3Q96DC8 303 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 PCDHA9Q9Y5H5 950 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 IGLV3-25P01717 112 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 GLP1RP43220 463 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 GPX6P59796 221 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 ATP1A4Q13733 1029 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 SFT2D3Q587I9 215 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 SPPL2CQ8IUH8 684 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 TEX29Q8N6K0 151 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 YIPF7Q8N8F6 280 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 RSC1A1Q92681 617 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 OMA1Q96E52 524 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 C1orf21Q9H246 121 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 NRXN2Q9P2S2 1712 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 PLSCR5A0PG75 271 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 M0QX08 132 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 ATP6V1B1P15313 513 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 RIPPLY1Q0D2K3 151 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 NKAIN1Q4KMZ8 207 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 CYBRD1Q53TN4 286 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 KIF18BQ86Y91 864 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 OR8H2Q8N162 312 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC15A4Q8N697 577 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 LRRC15Q8TF66 581 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 BORCS5Q969J3 196 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF707Q96C28 371 aaPredicted RBP12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 SH3YL1Q96HL8 342 aaPredicted RBP12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 UCK1Q9HA47 277 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 SESN1Q9Y6P5 492 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 MROH6A6NGR9 719 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 H0YIV9 168 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 PEX14O75381 377 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 CDC123O75794 336 aaPredicted RBP12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 NSA2O95478 260 aaKnown RBP12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 SELEP16581 610 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 GGT2P36268 569 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 GPR139Q6DWJ6 353 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 SYCE2Q6PIF2 218 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 TRIM73Q86UV7 250 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 OR7A2PQ8NGA2 310 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 AGAP11Q8TF27 550 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 THAP4Q8WY91 577 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 RADILQ96JH8 1075 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 RBCK1Q9BYM8 510 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 NANSQ9NR45 359 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 DDX28Q9NUL7 540 aaKnown RBP12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 GIN1Q9NXP7 522 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 SGK494L7N484 410 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 BCKDHAP12694 445 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 UNC50Q53HI1 259 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 CHTF18Q8WVB6 975 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 FCRL3Q96P31 734 aaPredicted RBP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 PCDHB10Q9UN67 800 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 KIAA1551Q9HCM1 1747 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 PTGES3LE9PB15 166 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 EIF4E2O60573 245 aaKnown RBP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 FMO6PO60774 539 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 PIAS2O75928 621 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 ATXN1LP0C7T5 689 aaKnown RBP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 MTHFD2P13995 350 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 GSSP48637 474 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 TEKQ02763 1124 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 OR7G3Q8NG95 312 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 BCL7CQ8WUZ0 217 aaPredicted RBP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 CLEC1BQ9P126 229 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 YY2O15391 372 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 ATE1O95260 518 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 KLKB1P03952 638 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 CSF2P04141 144 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 OR12D1P0DN82 309 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 CLUP10909 449 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 NR1H2P55055 460 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 ID2Q02363 134 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 PAPD4Q6PIY7 484 aaKnown RBP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 DCBLD1Q8N8Z6 715 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 OR2T33Q8NG76 320 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 COX4I2Q96KJ9 171 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 ALPK1Q96QP1 1244 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 MTG2Q9H4K7 406 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 CNIH4Q9P003 139 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 EGFL7Q9UHF1 273 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC22A7Q9Y694 548 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 GGT3PA6NGU5 568 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 C21orf140B9A014 251 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 ATP6V1G2O95670 118 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 PRKAR1AP10644 381 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 WNT7BP56706 349 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 STARD6P59095 220 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 AIMP2Q13155 320 aaKnown RBP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 SGCAQ16586 387 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 HOXB13Q92826 284 aaPredicted RBP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 LCORQ96JN0 433 aaPredicted RBP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 RNPEPL1Q9HAU8 725 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF358Q9NW07 568 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 BLOC1S5-TXNDC5H3BN57 136 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 WRBO00258 174 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms