RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 C6orf106Q9H6K1 298 aaPredicted RBP12.73□□□□□ -0.37
VHL-201ENST00000256474 NEUROD4Q9HD90 331 aa12.73□□□□□ -0.37
VHL-201ENST00000256474 FKBP14Q9NWM8 211 aa12.73□□□□□ -0.37
VHL-201ENST00000256474 CACNA1IQ9P0X4 2223 aa12.73□□□□□ -0.37
VHL-201ENST00000256474 PIP5K1CO60331 668 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 FCMRO60667 390 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SPTBP11277 2137 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 AHRP35869 848 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SRP54P61011 504 aaKnown RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 PSPHP78330 225 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.72□□□□□ -0.37
VHL-201ENST00000256474 PDE7AQ13946 482 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 LRRC32Q14392 662 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SLC9A5Q14940 896 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SLX4IPQ5VYV7 408 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 CNIH2Q6PI25 160 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 FAM92BQ6ZTR7 304 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 NRMQ8IXM6 262 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 Q8N402 240 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SIMC1Q8NDZ2 872 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 OR6F1Q8NGZ6 308 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 OR2L2Q8NH16 312 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 GOT1L1Q8NHS2 421 aaPredicted RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 UFD1Q92890 307 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 DCLRE1CQ96SD1 692 aaKnown RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 RAD9AQ99638 391 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SLC22A4Q9H015 551 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SLC35C2Q9NQQ7 365 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 A4GNTQ9UNA3 340 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 PLXND1Q9Y4D7 1925 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 ZNF670-ZNF695F2Z2N8 137 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 REM1O75628 298 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SMSP52788 366 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 CTBP2P56545 445 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SLC27A4Q6P1M0 643 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 NKAIN4Q8IVV8 208 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 UBQLNLQ8IYU4 475 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 NANOGP1Q8N7R0 232 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 ASCC1Q8N9N2 400 aaKnown RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 ANKK1Q8NFD2 765 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SLC38A2Q96QD8 506 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 MBNL1Q9NR56 388 aaKnown RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 SIRT3Q9NTG7 399 aaPredicted RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 SAGE1Q9NXZ1 904 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 VPS13AQ96RL7 3174 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 A0A087WUU8 490 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 H3BSH0 61 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 MOSPD3O75425 235 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 CXCR2P25025 360 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 BTN3A2P78410 334 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 DUSP2Q05923 314 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 SAXO2Q658L1 398 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 OR4C11Q6IEV9 310 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 ZNF770Q6IQ21 691 aaPredicted RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 LINC00299Q6ZSB3 139 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 GET4Q7L5D6 327 aaPredicted RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 CPA6Q8N4T0 437 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 ZNF557Q8N988 423 aaPredicted RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 OR4E2Q8NGC2 313 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 NEIL3Q8TAT5 605 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 ADAP2Q9NPF8 381 aa12.72□□□□□ -0.37
VHL-201ENST00000256474 NDRG2Q9UN36 371 aaKnown RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 ZFR2Q9UPR6 939 aaKnown RBP12.72□□□□□ -0.37
VHL-201ENST00000256474 TRPM6Q9BX84 2022 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 SRPRAP08240 638 aaKnown RBP12.71□□□□□ -0.37
VHL-201ENST00000256474 GKN3PP0CG01 181 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 IFNA8P32881 189 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 FABP5Q01469 135 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 ZNF33BQ06732 778 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 TGM3Q08188 693 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 TOR1AIP1Q5JTV8 583 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 MLIPQ5VWP3 458 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 ARL9Q6T311 187 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 ZNF793Q6ZN11 406 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 VASH1Q7L8A9 365 aaPredicted RBP12.71□□□□□ -0.37
VHL-201ENST00000256474 KLHDC8AQ8IYD2 350 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 CADM2Q8N3J6 435 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 KCT2Q8NC54 265 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 SMG7Q92540 1137 aaKnown RBP12.71□□□□□ -0.37
VHL-201ENST00000256474 FRMD6Q96NE9 622 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 QRFPRQ96P65 431 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 SLC6A17Q9H1V8 727 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 CACYBPQ9HB71 228 aaKnown RBP12.71□□□□□ -0.37
VHL-201ENST00000256474 TEKT2Q9UIF3 430 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 V9GYH0 126 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 FRMPD3Q5JV73 1810 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 ASCC3Q8N3C0 2202 aaKnown RBP12.71□□□□□ -0.37
VHL-201ENST00000256474 ABHD14A-ACY1A0A1B0GW23 586 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 A0A1W2PP55 124 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 SOCS6O14544 535 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 MID1O15344 667 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 TBX6O95947 436 aaPredicted RBP12.71□□□□□ -0.37
VHL-201ENST00000256474 EFEMP2O95967 443 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 LALBAP00709 142 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 CLTBP09497 229 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 CSF3P09919 207 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 WNT4P56705 351 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 SLC3A1Q07837 685 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 TJAP1Q5JTD0 557 aa12.71□□□□□ -0.37
VHL-201ENST00000256474 FAM27D1Q5T7N8 215 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms