RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZNF79Q15937 498 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 TMEM35AQ53FP2 167 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 ENTPD8Q5MY95 495 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 SLC25A30Q5SVS4 291 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 KIAA1211LQ6NV74 962 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 TMEM107Q6UX40 140 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 TMEM64Q6YI46 380 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 TMPRSS11AQ6ZMR5 421 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 TTLQ8NG68 377 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 KLK6Q92876 244 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 TMEM203Q969S6 136 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 MS4A6EQ96DS6 147 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 NELL2Q99435 816 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 RERGLQ9H628 205 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 SCN3AQ9NY46 2000 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 PLEKHM1Q9Y4G2 1056 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 ASB4Q9Y574 426 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 STON1Q9Y6Q2 735 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 IDH3BO43837 385 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 PAK4O96013 591 aaPredicted RBP13.52□□□□□ -0.24
HIF3A-202ENST00000244303 CPEP16870 476 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 HIST1H1TP22492 207 aaPredicted RBP13.52□□□□□ -0.24
HIF3A-202ENST00000244303 AZGP1P25311 298 aaKnown RBP13.52□□□□□ -0.24
HIF3A-202ENST00000244303 PBX2P40425 430 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 SMSP52788 366 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 C18orf63Q68DL7 685 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 NRARPQ7Z6K4 114 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 YAF2Q8IY57 180 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 ACOT4Q8N9L9 421 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 CHAC2Q8WUX2 184 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 TMCO6Q96DC7 493 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 PINK1Q9BXM7 581 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 SLC6A20Q9NP91 592 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 MRPS30Q9NP92 439 aaKnown RBP13.52□□□□□ -0.24
HIF3A-202ENST00000244303 PRDM7Q9NQW5 492 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 DDX28Q9NUL7 540 aaKnown RBP13.52□□□□□ -0.24
HIF3A-202ENST00000244303 SERGEFQ9UGK8 458 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 GPR52Q9Y2T5 361 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 SPIN1Q9Y657 262 aaPredicted RBP13.52□□□□□ -0.24
HIF3A-202ENST00000244303 ATG2AQ2TAZ0 1938 aa13.52□□□□□ -0.24
HIF3A-202ENST00000244303 A0A087WUU8 490 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 A0A0G2JPF8 293 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 OR52A4PA6NMU1 304 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 HNRNPCL2B2RXH8 293 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 HNRNPCL3B7ZW38 293 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 CASC3O15234 703 aaKnown RBP13.52□□□□□ -0.25
HIF3A-202ENST00000244303 FRS3O43559 492 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 AIFM1O95831 613 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 HNRNPCL4P0DMR1 293 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 ACADMP11310 421 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 PKLRP30613 574 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 ANXA11P50995 505 aaKnown RBP13.52□□□□□ -0.25
HIF3A-202ENST00000244303 GAS1P54826 345 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 DMPKQ09013 629 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 KRT33BQ14525 404 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 LARS2Q15031 903 aaKnown RBP13.52□□□□□ -0.25
HIF3A-202ENST00000244303 BAK1Q16611 211 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 OR2G6Q5TZ20 316 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 AGAP6Q5VW22 663 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 C22orf42Q6IC83 251 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 C11orf74Q86VG3 221 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 OR2L8Q8NGY9 312 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 SFXN5Q8TD22 340 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 SLC9A6Q92581 669 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 SLC25A46Q96AG3 418 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 WDFY2Q96P53 400 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 AGAP4Q96P64 663 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 TRMT61BQ9BVS5 477 aaKnown RBP13.52□□□□□ -0.25
HIF3A-202ENST00000244303 ANKRA2Q9H9E1 313 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 EQTNQ9NQ60 294 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 DZANK1Q9NVP4 752 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 ZNF221Q9UK13 617 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 YARS2Q9Y2Z4 477 aaKnown RBP13.52□□□□□ -0.25
HIF3A-202ENST00000244303 CMAHPQ9Y471 501 aa13.52□□□□□ -0.25
HIF3A-202ENST00000244303 UNC80Q8N2C7 3258 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 IQCMA0A1B0GVH7 501 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 A6NL46 340 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 LRRTM2O43300 516 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 NTN1O95631 604 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 MYL12AP19105 171 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 ATP5A1P25705 553 aaKnown RBP13.51□□□□□ -0.25
HIF3A-202ENST00000244303 CERS1P27544 350 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 WNT4P56705 351 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 TAS2R41P59536 307 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 FGL2Q14314 439 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 GNA13Q14344 377 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 ABHD17CQ6PCB6 329 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 BHLHB9Q6PI77 547 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 FBXL6Q8N531 539 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 OR52E1Q8NGJ3 308 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 NEDD4LQ96PU5 975 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 SAP130Q9H0E3 1048 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 SYNPO2LQ9H987 977 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 MARCH7Q9H992 704 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 ENTPD4Q9Y227 616 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 REV3LO60673 3130 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 FHP07954 510 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 TSPAN19P0C672 248 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 CLEC2LP0C7M8 214 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 MSL3P1P0C860 447 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms