RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SH3PXD2BA1X283 911 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 ZAR1LA6NP61 321 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 ZNF99A8MXY4 864 aaPredicted RBP17.3■□□□□ 0.36
HOXC11-201ENST00000243082 TMX2-CTNND1H3BSU7 103 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 RGS10O43665 173 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 OR10H3O60404 316 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 MRPS14O60783 128 aaKnown RBP17.3■□□□□ 0.36
HOXC11-201ENST00000243082 UGT2B17O75795 530 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 GPR75O95800 540 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 ALPPP05187 535 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 MAP2K4P45985 399 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 MASP1P48740 699 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 RPL6Q02878 288 aaKnown RBP17.3■□□□□ 0.36
HOXC11-201ENST00000243082 TMEM236Q5W0B7 351 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 PGBD2Q6P3X8 592 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 VRK2Q86Y07 508 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 P3H2Q8IVL5 708 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 MCATQ8IVS2 390 aaKnown RBP17.3■□□□□ 0.36
HOXC11-201ENST00000243082 SIX5Q8N196 739 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 DOK4Q8TEW6 326 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 IPCEF1Q8WWN9 437 aaPredicted RBP17.3■□□□□ 0.36
HOXC11-201ENST00000243082 CDS1Q92903 461 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 FKBP10Q96AY3 582 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 SHDQ96IW2 340 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 MIR1-1HGQ9H1L0 117 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 UCK1Q9HA47 277 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 CCNB1IP1Q9NPC3 277 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 SYT5O00445 386 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 ACVR2AP27037 513 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 MAPK10P53779 464 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 PRSS48Q7RTY5 328 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 DEPDC4Q8N2C3 294 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 DNAJC22Q8N4W6 341 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 C1orf216Q8TAB5 229 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 SLC9A6Q92581 669 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 TANKQ92844 425 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 FNDC11Q9BVV2 318 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 UCK2Q9BZX2 261 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 DOLKQ9UPQ8 538 aa17.3■□□□□ 0.36
HOXC11-201ENST00000243082 COLQQ9Y215 455 aaPredicted RBP17.3■□□□□ 0.36
HOXC11-201ENST00000243082 GPR55Q9Y2T6 319 aaPredicted RBP17.3■□□□□ 0.36
HOXC11-201ENST00000243082 A0A1W2PPC1 479 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 RDH16O75452 317 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 AGR2O95994 175 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 ACP2P11117 423 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 CAPZBP47756 277 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 TEKQ02763 1124 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 DYNC1I2Q13409 638 aaKnown RBP17.29■□□□□ 0.36
HOXC11-201ENST00000243082 DUSP5Q16690 384 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 PRTGQ2VWP7 1150 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 EXOSC6Q5RKV6 272 aaKnown RBP17.29■□□□□ 0.36
HOXC11-201ENST00000243082 PODNL1Q6PEZ8 512 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 KLHL35Q6PF15 583 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 FRRS1Q6ZNA5 592 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 AHSA2Q719I0 299 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 C17orf82Q86X59 251 aaPredicted RBP17.29■□□□□ 0.36
HOXC11-201ENST00000243082 SPEM1Q8N4L4 309 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 OR9A4Q8NGU2 314 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 ANKRD9Q96BM1 317 aaPredicted RBP17.29■□□□□ 0.36
HOXC11-201ENST00000243082 PRRC1Q96M27 445 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 NELL2Q99435 816 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 MAP3K3Q99759 626 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 ARHGDIGQ99819 225 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 DCUN1D5Q9BTE7 237 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 PSORS1C1Q9UIG5 152 aa17.29■□□□□ 0.36
HOXC11-201ENST00000243082 A0A1W2PPW3 197 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 LILRA5A6NI73 299 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 M0R129 80 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 TPST2O60704 377 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 PROS1P07225 676 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 OSMP13725 252 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 RAB38P57729 211 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 MGAT2Q10469 447 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 ILKQ13418 452 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 ARHGAP11BQ3KRB8 267 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 HSPA12BQ96MM6 686 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 FUNDC2Q9BWH2 189 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 ANKHQ9HCJ1 492 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 MKLN1Q9UL63 735 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 A0A087WV62 115 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 PLOD3O60568 738 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 MED26O95402 600 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 PRKAR1BP31321 381 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 CTSKP43235 329 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 PRICKLE4Q2TBC4 344 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 DHRS4L2Q6PKH6 230 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 RAB2BQ8WUD1 216 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 RORBQ92753 470 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 PRR14Q9BWN1 585 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 ACOT13Q9NPJ3 140 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 CTPS2Q9NRF8 586 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 FKBP14Q9NWM8 211 aa17.28■□□□□ 0.36
HOXC11-201ENST00000243082 WARS2Q9UGM6 360 aaKnown RBP17.28■□□□□ 0.36
HOXC11-201ENST00000243082 TMEM131Q92545 1883 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 AQP9O43315 295 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 CHST10O43529 356 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 FRS3O43559 492 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 MAN1A2O60476 641 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 NOL3O60936 208 aaKnown RBP17.27■□□□□ 0.36
HOXC11-201ENST00000243082 SLITRK5O94991 958 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms