RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SYT16Q17RD7 645 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 FAM214AQ32MH5 1076 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 C6orf141Q5SZD1 244 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 MFSD4BQ5TF39 518 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 ZNF691Q5VV52 312 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 GARNL3Q5VVW2 1013 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 GTF2IRD2BQ6EKJ0 949 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 TMEM71Q6P5X7 295 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 ZC3H14Q6PJT7 736 aaKnown RBP8.31□□□□□ -1.08
PHGDH-219ENST00000641513 TBPL2Q6SJ96 375 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 TMEM64Q6YI46 380 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 TTLL10Q6ZVT0 673 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 KCTD8Q6ZWB6 473 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 EIF3MQ7L2H7 374 aaKnown RBP8.31□□□□□ -1.08
PHGDH-219ENST00000641513 PRSS42Q7Z5A4 293 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 GTF2IRD2Q86UP8 949 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 CLVS1Q8IUQ0 354 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-219ENST00000641513 SLC30A8Q8IWU4 369 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 CARFQ8N187 725 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 FAM181AQ8N9Y4 354 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 TMEM52Q8NDY8 209 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 CHDHQ8NE62 594 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-219ENST00000641513 OR5D16Q8NGK9 328 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 SUN3Q8TAQ9 357 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 IFI44Q8TCB0 444 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 DOK4Q8TEW6 326 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 XAGE5Q8WWM1 108 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 TMIGD2Q96BF3 282 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 C12orf43Q96C57 262 aaKnown RBP8.31□□□□□ -1.08
PHGDH-219ENST00000641513 ELP4Q96EB1 424 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 OTUB1Q96FW1 271 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-219ENST00000641513 C10orf90Q96M02 699 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 COG8Q96MW5 612 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 ZNF681Q96N22 645 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 NDC1Q9BTX1 674 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 CHRNA10Q9GZZ6 450 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 LRRN3Q9H3W5 708 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 TMEM38AQ9H6F2 299 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 POLR1BQ9H9Y6 1135 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 CCNB1IP1Q9NPC3 277 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 CUTCQ9NTM9 273 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 TBCCD1Q9NVR7 557 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 SERTAD3Q9UJW9 196 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 MAU2Q9Y6X3 613 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 R4GN57 208 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 FER1L5A0AVI2 2057 aa8.31□□□□□ -1.08
PHGDH-219ENST00000641513 LY6G6EA0A0G2JKS1 128 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 hCG_2039718K7EN88 272 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 CYR61O00622 381 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 CLDN4O14493 209 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 FOXS1O43638 330 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 FGF17O60258 216 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 CDC123O75794 336 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-219ENST00000641513 NSA2O95478 260 aaKnown RBP8.3□□□□□ -1.08
PHGDH-219ENST00000641513 IFNA14P01570 189 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 HMGN2P05204 90 aaKnown RBP8.3□□□□□ -1.08
PHGDH-219ENST00000641513 FOLR1P15328 257 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 PPP2R1BP30154 601 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 DNAJA1P31689 397 aaKnown RBP8.3□□□□□ -1.08
PHGDH-219ENST00000641513 ARHGDIAP52565 204 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 EMP3P54852 163 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 CDH15P55291 814 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 ISL1P61371 349 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 STX4Q12846 297 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 PMS2P3Q13401 168 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 FAM53BQ14153 422 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 ERV3-1Q14264 604 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 INAVAQ3KP66 663 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 GPAT3Q53EU6 434 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 RPS26P11Q5JNZ5 115 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-219ENST00000641513 OTUD3Q5T2D3 398 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-219ENST00000641513 PHF19Q5T6S3 580 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 OR2T5Q6IEZ7 315 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 TCEAL6Q6IPX3 200 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 REEP3Q6NUK4 255 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 CBLL1Q75N03 491 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 BMP8AQ7Z5Y6 402 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 VTCN1Q7Z7D3 282 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 KMT5CQ86Y97 462 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 ZDHHC21Q8IVQ6 265 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 SHISA5Q8N114 240 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 D2HGDHQ8N465 521 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 PIK3C3Q8NEB9 887 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 OR2T29Q8NH02 315 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 OR1L3Q8NH93 324 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 PSMA8Q8TAA3 256 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 SPPL2AQ8TCT8 520 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 ADAMTS18Q8TE60 1221 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 TCEAL3Q969E4 200 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 RNF31Q96EP0 1072 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 C16orf58Q96GQ5 468 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 HSH2DQ96JZ2 352 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 ZNF285Q96NJ3 590 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 MUS81Q96NY9 551 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 EPYCQ99645 322 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 PITX2Q99697 317 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 DPYSL5Q9BPU6 564 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 ZNF768Q9H5H4 540 aaKnown RBP8.3□□□□□ -1.08
PHGDH-219ENST00000641513 ANKRA2Q9H9E1 313 aa8.3□□□□□ -1.08
PHGDH-219ENST00000641513 A4GALTQ9NPC4 353 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms