RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 G3V3Y1 287 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 PDPK1O15530 556 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 DRD5P21918 477 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 MEOX1P50221 254 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 CLDN8P56748 225 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 C21orf58P58505 322 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 SRSF1Q07955 248 aaKnown RBP eCLIP24.59■■□□□ 1.531e-7■■■□□ 14.7
VEGFA-231ENST00000640499 HLA-DQA1Q5Y7H0 255 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 ATCAYQ86WG3 371 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 SIAH3Q8IW03 269 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 PRR22Q8IZ63 422 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 OR2L13Q8N349 312 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 OR10G3Q8NGC4 313 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 COQ8BQ96D53 544 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 LCORQ96JN0 433 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-231ENST00000640499 SLCO1B3Q9NPD5 702 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 NOP53Q9NZM5 478 aaKnown RBP24.59■■□□□ 1.53
VEGFA-231ENST00000640499 PRODH2Q9UF12 536 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 C19orf53Q9UNZ5 99 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-231ENST00000640499 NPFFR2Q9Y5X5 522 aa24.59■■□□□ 1.53
VEGFA-231ENST00000640499 CHCHD2Q9Y6H1 151 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-231ENST00000640499 A0A087WV62 115 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 ANKRD28O15084 1053 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 BCAS2O75934 225 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-231ENST00000640499 ALDOCP09972 364 aaKnown RBP24.58■■□□□ 1.53
VEGFA-231ENST00000640499 CT45A8P0DMV1 189 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 CT45A9P0DMV2 189 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 LBPP18428 481 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 RFC3P40938 356 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 PPICP45877 212 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 CDK9P50750 372 aaKnown RBP24.58■■□□□ 1.53
VEGFA-231ENST00000640499 CORO7P57737 925 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 FBXW4P57775 412 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 NTRK2Q16620 822 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 CT45A2Q5DJT8 189 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 DESI1Q6ICB0 168 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 NPSR1Q6W5P4 371 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 LRRC34Q8IZ02 419 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 TAGAPQ8N103 731 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 ZFP62Q8NB50 900 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-231ENST00000640499 ST6GALNAC3Q8NDV1 305 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 PAQR8Q8TEZ7 354 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 MAELQ96JY0 434 aaKnown RBP24.58■■□□□ 1.53
VEGFA-231ENST00000640499 FOLH1BQ9HBA9 442 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 ACSS1Q9NUB1 689 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-231ENST00000640499 CFL2Q9Y281 166 aa24.58■■□□□ 1.53
VEGFA-231ENST00000640499 BAHCC1Q9P281 2608 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 CRYABP02511 175 aaKnown RBP24.57■■□□□ 1.52
VEGFA-231ENST00000640499 EDN3P14138 238 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 ABCD3P28288 659 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 EPHA3P29320 983 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 KCNC4Q03721 635 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 HSPB3Q12988 150 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 MAD2L1Q13257 205 aaPredicted RBP24.57■■□□□ 1.52
VEGFA-231ENST00000640499 ESPL1Q14674 2120 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 OGFOD2Q6N063 350 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 R3HCC1LQ7Z5L2 792 aaKnown RBP24.57■■□□□ 1.52
VEGFA-231ENST00000640499 ZGRF1Q86YA3 2104 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 OR2M7Q8NG81 312 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 BTBD9Q96Q07 612 aa24.57■■□□□ 1.52
VEGFA-231ENST00000640499 CNOT11Q9UKZ1 510 aaKnown RBP24.57■■□□□ 1.52
VEGFA-231ENST00000640499 GOLGA8QA0A0J9YX86 632 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 GOLGA8OA6NCC3 632 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 GOLGA8NF8WBI6 632 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 KLRC4-KLRK1H3BQV0 150 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 TO15178 435 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 SLITRK5O94991 958 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 IFI6P09912 130 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 PRPS1L1P21108 318 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 CNR1P21554 472 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 HPCAL1P37235 193 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 PIGAP37287 484 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 EIF2S3LQ2VIR3 472 aaKnown RBP24.56■■□□□ 1.52
VEGFA-231ENST00000640499 SLC9B1Q4ZJI4 515 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 OR5M3Q8NGP4 307 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 PIWIL2Q8TC59 973 aaKnown RBP24.56■■□□□ 1.52
VEGFA-231ENST00000640499 NTNG2Q96CW9 530 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 MAGED4Q96JG8 741 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 C7orf26Q96N11 449 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 TSPAN10Q9H1Z9 355 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-231ENST00000640499 SIRT3Q9NTG7 399 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-231ENST00000640499 POLEQ07864 2286 aa24.56■■□□□ 1.52
VEGFA-231ENST00000640499 ANKUB1A6NFN9 424 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 FRG2CA6NGY1 282 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 ABCB1P08183 1280 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-231ENST00000640499 DCAF7P61962 342 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 PSG6Q00889 435 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 FOXO1Q12778 655 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 CPTPQ5TA50 214 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 SLC22A10Q63ZE4 541 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 CAMKMTQ7Z624 323 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 OR4N2Q8NGD1 307 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 LRRC8CQ8TDW0 803 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 CKAP2Q8WWK9 683 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 ZBED6CLQ96FA7 236 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-231ENST00000640499 RYDENQ9NUL5 291 aaKnown RBP24.55■■□□□ 1.52
VEGFA-231ENST00000640499 INTS9Q9NV88 658 aaKnown RBP24.55■■□□□ 1.52
VEGFA-231ENST00000640499 NTMQ9P121 344 aa24.55■■□□□ 1.52
VEGFA-231ENST00000640499 CLEC18AA5D8T8 446 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 TRPC5OSA6NMA1 111 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms