RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 MRPL12P52815 198 aaKnown RBP-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 RPL32P62910 135 aaKnown RBP-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 OC90Q02509 493 aaPredicted RBP-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 NSDHLQ15738 373 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 UBE2SQ16763 222 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 CMPK2Q5EBM0 449 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 UFSP1Q6NVU6 142 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 DCLRE1AQ6PJP8 1040 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 WDR74Q6RFH5 385 aaPredicted RBP-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 MOB2Q70IA6 237 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 UBALD2Q8IYN6 164 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 NKAPQ8N5F7 415 aaKnown RBP-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 GVQW1Q8N7I0 195 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 KIAA0895Q8NCT3 520 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 OR1P1Q8NH06 330 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 TRAF3IP1Q8TDR0 691 aaPredicted RBP-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 GIMAP1Q8WWP7 306 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 MRPL24Q96A35 216 aaKnown RBP-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 TMEM159Q96B96 161 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 GPR61Q9BZJ8 451 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 IFI27L2Q9H2X8 130 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 SNX25Q9H3E2 840 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 XAB2Q9HCS7 855 aaKnown RBP-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 A0A1W2PPM1 405 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 OR2A25A4D2G3 310 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 LAD1O00515 517 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 CLDN4O14493 209 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 ANGPTL7O43827 346 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 PARNO95453 639 aaKnown RBP-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 ANGP03950 147 aaKnown RBP-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 ACKR3P25106 362 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 UCP1P25874 307 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 PTBP1P26599 531 aaKnown RBP eCLIP-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 PRDX3P30048 256 aaKnown RBP-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 UBXN2AP68543 259 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 C17orf67Q0P5P2 114 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 CEACAM7Q14002 265 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 STK11Q15831 433 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 CBWD6Q4V339 395 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 CBWD3Q5JTY5 395 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 RABGAP1LQ5R372 815 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 METTL11BQ5VVY1 283 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 MOXD1Q6UVY6 613 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 ZBTB49Q6ZSB9 765 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 ESX1Q8N693 406 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 ANKRD13CQ8N6S4 541 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 C1orf131Q8NDD1 294 aaKnown RBP-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 BIRC7Q96CA5 298 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 MUS81Q96NY9 551 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 TEKT3Q9BXF9 490 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 GOLPH3LQ9H4A5 285 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 KAT8Q9H7Z6 458 aaKnown RBP-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 TRIM45Q9H8W5 580 aaPredicted RBP-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 VIPAS39Q9H9C1 493 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 PREBQ9HCU5 417 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 CRNNQ9UBG3 495 aaPredicted RBP-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 NRBP1Q9UHY1 535 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 SLC13A4Q9UKG4 626 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 THSD7BQ9C0I4 1608 aa-0.54□□□□□ -2.5
LMBR1-222ENST00000638959 SYNE1Q8NF91 8797 aaKnown RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 DHRS7CA6NNS2 312 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 TMEM150CB9EJG8 249 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 CTDSP2O14595 271 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 KIAA0513O60268 411 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 USO1O60763 962 aaKnown RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 TBX10O75333 385 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 ANXA9O76027 345 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 CSF2P04141 144 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 SH3BGRP55822 239 aaPredicted RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 VLDLRP98155 873 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 ZIC1Q15915 447 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 TSTQ16762 297 aaKnown RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 MAP9Q49MG5 647 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 PCOTHQ58A44 107 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 TAF3Q5VWG9 929 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 ALKBH5Q6P6C2 394 aaKnown RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 CYP26C1Q6V0L0 522 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 ACP7Q6ZNF0 438 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 GPR141Q7Z602 305 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 KBTBD6Q86V97 674 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 MEX3DQ86XN8 651 aaKnown RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 ZNF740Q8NDX6 193 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 OR9A1PQ8NGU1 263 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 P2RX5Q93086 422 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 PNPLA2Q96AD5 504 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 NOL4LQ96MY1 436 aaPredicted RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 DOK1Q99704 481 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 COQ7Q99807 217 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 CCM2Q9BSQ5 444 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 TEX13AQ9BXU3 409 aaPredicted RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 PCGF6Q9BYE7 350 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 Q9HAA7 133 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 SH2D2AQ9NP31 389 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 ZNF629Q9UEG4 869 aaPredicted RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 RUVBL2Q9Y230 463 aaKnown RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 ZSWIM8A7E2V4 1837 aa-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 NUP214P35658 2090 aaPredicted RBP-0.55□□□□□ -2.5
LMBR1-222ENST00000638959 SEC16AO15027 2179 aa-0.56□□□□□ -2.5
LMBR1-222ENST00000638959 MALRD1Q5VYJ5 2156 aa-0.56□□□□□ -2.5
LMBR1-222ENST00000638959 KAT6BQ8WYB5 2073 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms