RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 TBX19O60806 448 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 ENTPD6O75354 484 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 STX11O75558 287 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 CXCL14O95715 111 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 OLFM2O95897 454 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 SLC16A8O95907 504 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 TGFB1P01137 390 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 IL3P08700 152 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 SLC2A2P11168 524 aaPredicted RBP3.77□□□□□ -1.81
SCN1A-214ENST00000637038 DDCP20711 480 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 AZGP1P25311 298 aaKnown RBP3.77□□□□□ -1.81
SCN1A-214ENST00000637038 IMPA1P29218 277 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 MAP2K3P46734 347 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 TRA2BP62995 288 aaKnown RBP3.77□□□□□ -1.81
SCN1A-214ENST00000637038 MC1RQ01726 317 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 RAB40BQ12829 278 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 RPA4Q13156 261 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 PDE7AQ13946 482 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 DSG2Q14126 1118 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 KRT33BQ14525 404 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 LARS2Q15031 903 aaKnown RBP3.77□□□□□ -1.81
SCN1A-214ENST00000637038 BCL7AQ4VC05 210 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 CRTC2Q53ET0 693 aaPredicted RBP3.77□□□□□ -1.81
SCN1A-214ENST00000637038 ATAD3CQ5T2N8 411 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 RAET1GQ6H3X3 334 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 LCTLQ6UWM7 567 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 Q6ZVL8 140 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF765Q7L2R6 523 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 TAS1R1Q7RTX1 841 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 JAZF1Q86VZ6 243 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 TMPRSS12Q86WS5 348 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 DCUN1D3Q8IWE4 304 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 CFAP206Q8IYR0 622 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 KLHL36Q8N4N3 616 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 SRFBP1Q8NEF9 429 aaKnown RBP3.77□□□□□ -1.81
SCN1A-214ENST00000637038 SMPDL3AQ92484 453 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 RGMAQ96B86 450 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 NEURL3Q96EH8 262 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 RBM18Q96H35 190 aaKnown RBP3.77□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF354BQ96LW1 612 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 MED18Q9BUE0 208 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 RAB11FIP5Q9BXF6 653 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 OR51B5Q9H339 312 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 CUEDC1Q9NWM3 386 aaPredicted RBP3.77□□□□□ -1.81
SCN1A-214ENST00000637038 C14orf119Q9NWQ9 140 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 NDUFB11Q9NX14 153 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 ADAM29Q9UKF5 820 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 POU2F3Q9UKI9 436 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 ING4Q9UNL4 249 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 ASF1AQ9Y294 204 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 DOCK6Q96HP0 2047 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 FAM208BQ5VWN6 2430 aa3.77□□□□□ -1.81
SCN1A-214ENST00000637038 SLC5A10A0PJK1 596 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 GSAPA4D1B5 854 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 KPNA3O00505 521 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TFECO14948 347 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CASC3O15234 703 aaKnown RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 VEGFDO43915 354 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 MTX2O75431 263 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SNAPC5O75971 98 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 LGI1O95970 557 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 AGR2O95994 175 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 DRD2P14416 443 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PAICSP22234 425 aaKnown RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 EPHA2P29317 976 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 MPLP40238 635 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PREPP48147 710 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 STK19P49842 368 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 WNT4P56705 351 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TAS2R41P59536 307 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PSPHP78330 225 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CYP4F8P98187 520 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 B4GALNT1Q00973 533 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF91Q05481 1191 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 HNRNPA0Q13151 305 aaKnown RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ARHGAP19Q14CB8 494 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TRAM1Q15629 374 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 HACD4Q5VWC8 232 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF57Q68EA5 555 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TNFAIP8L2Q6P589 184 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 KLHL17Q6TDP4 642 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM92Q6UXU6 159 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 NOXA1Q86UR1 476 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 FAM124AQ86V42 546 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PLCZ1Q86YW0 608 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CMTM8Q8IZV2 173 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CLIP4Q8N3C7 705 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TCEANCQ8N8B7 351 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF248Q8NDW4 579 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 IL17RDQ8NFM7 739 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 OR56A1Q8NGH5 318 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 OR5AK3PQ8NH89 298 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 VANGL1Q8TAA9 524 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SUN3Q8TAQ9 357 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 OR8D1Q8WZ84 308 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 OSTF1Q92882 214 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 NEIL2Q969S2 332 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PDXPQ96GD0 296 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ZC3H10Q96K80 434 aaKnown RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF578Q96N58 590 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms