RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 NFKBIL1Q9UBC1 381 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 HCSTQ9UBK5 93 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 P2RX2Q9UBL9 471 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 EXTL2Q9UBQ6 330 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 CBLCQ9ULV8 474 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 A0A0A6YYJ9 748 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 HMGN4O00479 90 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 HOXA2O43364 376 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 SLC28A2O43868 658 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 CELF2O95319 508 aaKnown RBP13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 C1orf105O95561 183 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 POU3F3P20264 500 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 ACLYP53396 1101 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 CSTF1Q05048 431 aaKnown RBP13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 TSTA3Q13630 321 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 FCN2Q15485 313 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 KLHL12Q53G59 568 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 TPGS2Q68CL5 300 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 SDE2Q6IQ49 451 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 LUZP2Q86TE4 346 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 LRRC28Q86X40 367 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 ADGRF3Q8IZF5 1079 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 KLHL36Q8N4N3 616 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 POGLUT1Q8NBL1 392 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 OR4M2Q8NGB6 313 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 SMPDL3AQ92484 453 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 RFT1Q96AA3 541 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 TMED9Q9BVK6 235 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 RSPO3Q9BXY4 272 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 PPIL3Q9H2H8 161 aaKnown RBP13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 SPNS1Q9H2V7 528 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 TBC1D17Q9HA65 648 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 SRRDQ9UH36 339 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 MOSPD1Q9UJG1 213 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 CLEC4EQ9ULY5 219 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 MGAT4AQ9UM21 535 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 PCM1Q15154 2024 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 CCDC88CQ9P219 2028 aa13.98□□□□□ -0.17
CACNA1A-220ENST00000635988 LRRTM2O43300 516 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 ABLIM3O94929 683 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 APOL3O95236 402 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 RAF1P04049 648 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 ANXA3P12429 323 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 CTSOP43234 321 aaPredicted RBP13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 TAP2Q03519 686 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 LRRC73Q5JTD7 316 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 FAAH2Q6GMR7 532 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 BRAT1Q6PJG6 821 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 GDPD4Q6W3E5 623 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 Q6ZVL8 140 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 HSD11B1LQ7Z5J1 315 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 OR8H3Q8N146 312 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 ZFP41Q8N8Y5 198 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 RASGEF1AQ8N9B8 481 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 MORN4Q8NDC4 146 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 OR52N1Q8NH53 320 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 BCL7CQ8WUZ0 217 aaPredicted RBP13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 NACC2Q96BF6 587 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 KCTD12Q96CX2 325 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 PRRC1Q96M27 445 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 TREX2Q9BQ50 279 aaPredicted RBP13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 TEX12Q9BXU0 123 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 SAP130Q9H0E3 1048 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 KCNN2Q9H2S1 579 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 RNF215Q9Y6U7 377 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 OLFM2O95897 454 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 ELK1P19419 428 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 CELP19835 753 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 PPP2R1BP30154 601 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 AGFG1P52594 562 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 CTSCP53634 463 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 HSD17B12Q53GQ0 312 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 HENMT1Q5T8I9 393 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 CD276Q5ZPR3 534 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 FAM83HQ6ZRV2 1179 aaPredicted RBP13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 GLRX5Q86SX6 157 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 TMEM150AQ86TG1 271 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 SLC9B2Q86UD5 537 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 FBXL6Q8N531 539 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 OR5M3Q8NGP4 307 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 GNPDA2Q8TDQ7 276 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 SCMH1Q96GD3 660 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 RIOK2Q9BVS4 552 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 RNF32Q9H0A6 362 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 CYSLTR2Q9NS75 346 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 SLC25A13Q9UJS0 675 aa13.97□□□□□ -0.17
CACNA1A-220ENST00000635988 NCR1O76036 304 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 UBXN7O94888 489 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 URODP06132 367 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 OR12D1P0DN82 309 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 MTNR1BP49286 362 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 CDH11P55287 796 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 LHFPL3Q86UP9 236 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 NPAS4Q8IUM7 802 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 LILRA3Q8N6C8 439 aaPredicted RBP13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 THAP7Q9BT49 309 aaPredicted RBP13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 ABCG5Q9H222 651 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 SH2B3Q9UQQ2 575 aa13.96□□□□□ -0.17
CACNA1A-220ENST00000635988 STON1Q9Y6Q2 735 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms