RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 ZNF227Q86WZ6 799 aa14.31□□□□□ -0.12
CLN6-211ENST00000635754 DND1Q8IYX4 353 aaKnown RBP14.31□□□□□ -0.12
CLN6-211ENST00000635754 OR2L13Q8N349 312 aa14.31□□□□□ -0.12
CLN6-211ENST00000635754 NUDT8Q8WV74 236 aa14.31□□□□□ -0.12
CLN6-211ENST00000635754 TESCQ96BS2 214 aa14.31□□□□□ -0.12
CLN6-211ENST00000635754 MAGED4Q96JG8 741 aa14.31□□□□□ -0.12
CLN6-211ENST00000635754 OCEL1Q9H607 264 aa14.31□□□□□ -0.12
CLN6-211ENST00000635754 TIMMDC1Q9NPL8 285 aa14.31□□□□□ -0.12
CLN6-211ENST00000635754 GPR45Q9Y5Y3 372 aa14.31□□□□□ -0.12
CLN6-211ENST00000635754 PRRC2CQ9Y520 2896 aaKnown RBP14.3□□□□□ -0.12
CLN6-211ENST00000635754 CAPN14A8MX76 684 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 E9PBE3 544 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 UPK1AO00322 258 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 ZNF354AO60765 605 aaPredicted RBP14.3□□□□□ -0.12
CLN6-211ENST00000635754 SP1P08047 785 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 MDH1P40925 334 aaKnown RBP14.3□□□□□ -0.12
CLN6-211ENST00000635754 KIR3DL1P43629 444 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 PPICP45877 212 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 TMED10P49755 219 aaKnown RBP14.3□□□□□ -0.12
CLN6-211ENST00000635754 CDK9P50750 372 aaKnown RBP14.3□□□□□ -0.12
CLN6-211ENST00000635754 MLLT10P55197 1068 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 NME5P56597 212 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 TLE1Q04724 770 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 ZNF155Q12901 538 aaPredicted RBP14.3□□□□□ -0.12
CLN6-211ENST00000635754 NNATQ16517 81 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 MAPKAPK3Q16644 382 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 TMEM198Q66K66 360 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 SLC25A25Q6KCM7 469 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 SZRD1Q7Z422 152 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 OR8J2Q8NGG1 315 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 OR5P2Q8WZ92 322 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 SPACA9Q96E40 222 aaPredicted RBP14.3□□□□□ -0.12
CLN6-211ENST00000635754 HSPBAP1Q96EW2 488 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 SCMH1Q96GD3 660 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 LCORQ96JN0 433 aaPredicted RBP14.3□□□□□ -0.12
CLN6-211ENST00000635754 MARK4Q96L34 752 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 BTBD9Q96Q07 612 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 ZBTB18Q99592 522 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 EBF4Q9BQW3 602 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 SIKE1Q9BRV8 207 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 CCDC28BQ9BUN5 200 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 HES7Q9BYE0 225 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 NXF5Q9H1B4 397 aaKnown RBP14.3□□□□□ -0.12
CLN6-211ENST00000635754 CLMPQ9H6B4 373 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 FOLH1BQ9HBA9 442 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 C3orf14Q9HBI5 128 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 NEUROD4Q9HD90 331 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 NPHS2Q9NP85 383 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 MAP10Q9P2G4 905 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 KLF13Q9Y2Y9 288 aaPredicted RBP14.3□□□□□ -0.12
CLN6-211ENST00000635754 EXPH5Q8NEV8 1989 aa14.3□□□□□ -0.12
CLN6-211ENST00000635754 FRG2CA6NGY1 282 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 ACOX3O15254 700 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 CFLARO15519 480 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 NME2P1O60361 137 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 ERN1O75460 977 aaKnown RBP14.29□□□□□ -0.12
CLN6-211ENST00000635754 RASAL1O95294 804 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 C6orf47O95873 294 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 VIMP08670 466 aaKnown RBP14.29□□□□□ -0.12
CLN6-211ENST00000635754 FBXO45P0C2W1 286 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 DRD5P21918 477 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 NME2P22392 152 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 UFM1P61960 85 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 PSPHP78330 225 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 INPP5JQ15735 1006 aaPredicted RBP14.29□□□□□ -0.12
CLN6-211ENST00000635754 PDCD4Q53EL6 469 aaKnown RBP14.29□□□□□ -0.12
CLN6-211ENST00000635754 ANXA8L1Q5VT79 327 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 OR4F3Q6IEY1 312 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 FAM180AQ6UWF9 173 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 RTL4Q6ZR62 310 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 GALNTL5Q7Z4T8 443 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 CISD2Q8N5K1 135 aaKnown RBP14.29□□□□□ -0.12
CLN6-211ENST00000635754 GOLM1Q8NBJ4 401 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 FAM98AQ8NCA5 519 aaKnown RBP14.29□□□□□ -0.12
CLN6-211ENST00000635754 PSD4Q8NDX1 1056 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 VPS37AQ8NEZ2 397 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 CPT1CQ8TCG5 803 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 THOC1Q96FV9 657 aaKnown RBP14.29□□□□□ -0.12
CLN6-211ENST00000635754 SGCZQ96LD1 299 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 VSTM2LQ96N03 204 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 CCDC134Q9H6E4 229 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 GPR55Q9Y2T6 319 aaPredicted RBP14.29□□□□□ -0.12
CLN6-211ENST00000635754 SNX8Q9Y5X2 465 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 NPFFR2Q9Y5X5 522 aa14.29□□□□□ -0.12
CLN6-211ENST00000635754 COPG1Q9Y678 874 aaKnown RBP14.29□□□□□ -0.12
CLN6-211ENST00000635754 RNASET2O00584 256 aaKnown RBP14.28□□□□□ -0.12
CLN6-211ENST00000635754 EMC8O43402 210 aa14.28□□□□□ -0.12
CLN6-211ENST00000635754 PSMG1O95456 288 aa14.28□□□□□ -0.12
CLN6-211ENST00000635754 TROVE2P10155 538 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLN6-211ENST00000635754 ABCD3P28288 659 aa14.28□□□□□ -0.12
CLN6-211ENST00000635754 S100A3P33764 101 aa14.28□□□□□ -0.12
CLN6-211ENST00000635754 STX1BP61266 288 aa14.28□□□□□ -0.12
CLN6-211ENST00000635754 PRR5P85299 388 aa14.28□□□□□ -0.12
CLN6-211ENST00000635754 ZNHIT3Q15649 155 aaPredicted RBP14.28□□□□□ -0.12
CLN6-211ENST00000635754 ZNF791Q3KP31 576 aaPredicted RBP14.28□□□□□ -0.12
CLN6-211ENST00000635754 FAM174BQ3ZCQ3 159 aa14.28□□□□□ -0.12
CLN6-211ENST00000635754 PRR30Q53SZ7 412 aaPredicted RBP14.28□□□□□ -0.12
CLN6-211ENST00000635754 SPANXN4Q5MJ08 99 aa14.28□□□□□ -0.12
CLN6-211ENST00000635754 LYPD8Q6UX82 237 aa14.28□□□□□ -0.12
CLN6-211ENST00000635754 MDGA2Q7Z553 956 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms