RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 MARVELD2Q8N4S9 558 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 OR2T4Q8NH00 348 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 FAM3CQ92520 227 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 MAL2Q969L2 176 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 FKBP10Q96AY3 582 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 LRFN5Q96NI6 719 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 OR51B5Q9H339 312 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 OR2S2Q9NQN1 319 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 PLEK2Q9NYT0 353 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 FBXO7Q9Y3I1 522 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 RIPK3Q9Y572 518 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 ATRNO75882 1429 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 PRSS51A0A1B0GVH4 220 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 LRRC30A6NM36 301 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 YJEFN3A6XGL0 299 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CD300LBA8K4G0 201 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 LOC730098B7Z3J9 87 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 KCNK5O95279 499 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 TBX18O95935 607 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SUOXP51687 545 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 FXYD4P59646 89 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 UBE2G2P60604 165 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 KCNK18Q7Z418 384 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 PM20D2Q8IYS1 436 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SAMD12Q8N8I0 201 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 DCAF4L2Q8NA75 395 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 NEIL3Q8TAT5 605 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SNAPC3Q92966 411 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 PEX11GQ96HA9 241 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 UBL7Q96S82 380 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 TSNAXQ99598 290 aaKnown RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 NMUR2Q9GZQ4 415 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 TUBG2Q9NRH3 451 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SACM1LQ9NTJ5 587 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 MTMR11A4FU01 709 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 AQP12BA6NM10 295 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CENPBD1B2RD01 187 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 EI24O14681 340 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SC5DO75845 299 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 RHOP08100 348 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 UCHL1P09936 223 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CT45A6P0DMU7 189 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CT45A5P0DMU8 189 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CT45A7P0DMV0 189 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CT45A8P0DMV1 189 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CT45A9P0DMV2 189 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CRABP1P29762 137 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SFTPDP35247 375 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 IDH3GP51553 393 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CT45A2Q5DJT8 189 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CT45A1Q5HYN5 189 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 KIAA1614Q5VZ46 1190 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 OR52W1Q6IF63 320 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 UNC5DQ6UXZ4 953 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 AQP12AQ8IXF9 295 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 HS3ST5Q8IZT8 346 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 OR51G2Q8NGK0 314 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CT45A3Q8NHU0 189 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 AURKBQ96GD4 344 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SENP5Q96HI0 755 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SGIP1Q9BQI5 828 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SYT17Q9BSW7 474 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 RPF2Q9H7B2 306 aaKnown RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM45AQ9NWC5 275 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 STEAP1Q9UHE8 339 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 PTRH2Q9Y3E5 179 aaKnown RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CNTRLQ7Z7A1 2325 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 ADGRB2O60241 1585 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 HMX3A6NHT5 357 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 H3BML4 177 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CRTAPO75718 401 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 GABRR1P24046 479 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 HTR3AP46098 478 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 ELAVL3Q14576 367 aaKnown RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 PON2Q15165 354 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 MS4A13Q5J8X5 152 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 DCAF12Q5T6F0 453 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 RTL6Q6ICC9 239 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 MTMR14Q8NCE2 650 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CPEB3Q8NE35 698 aaKnown RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CSNK2A3Q8NEV1 391 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 OR4D6Q8NGJ1 314 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 ESAMQ96AP7 390 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 BOD1Q96IK1 185 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 INPP4AQ96PE3 977 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 NUDT9Q9BW91 350 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SLC6A16Q9GZN6 736 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 AKTIPQ9H8T0 292 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 MKS1Q9NXB0 559 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CD207Q9UJ71 328 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 PRELID3BQ9Y3B1 194 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SLC22A31A6NKX4 558 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 C2CD4BA6NLJ0 364 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 HEPACAM2A8MVW5 462 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 TIMM8AO60220 97 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 CREG1O75629 220 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 BMP6P22004 513 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 PAX6P26367 422 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 GDF1P27539 372 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms