RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TRIM7Q9C029 511 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC39A8Q9C0K1 460 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 PORCNQ9H237 461 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 UBQLN3Q9H347 655 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 LIME1Q9H400 295 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 ZWILCHQ9H900 591 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 MARCH7Q9H992 704 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 GNB4Q9HAV0 340 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 S100A14Q9HCY8 104 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 ZCCHC17Q9NP64 241 aaKnown RBP0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 IARS2Q9NSE4 1012 aaKnown RBP0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 MED17Q9NVC6 651 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 PLEK2Q9NYT0 353 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 TAS2R16Q9NYV7 291 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 VPS18Q9P253 973 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF319Q9P2F9 582 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 EIF3KQ9UBQ5 218 aaKnown RBP0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 GIMAP2Q9UG22 337 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 RSPH14Q9UHP6 348 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 TRMT112Q9UI30 125 aaKnown RBP0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 GTF3C4Q9UKN8 822 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 CELA1Q9UNI1 258 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 VSIG4Q9Y279 399 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 EXOC6BQ9Y2D4 811 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 TMED7Q9Y3B3 224 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 MRPS18CQ9Y3D5 142 aaKnown RBP0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 FBXO7Q9Y3I1 522 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 KNSTRNQ9Y448 316 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 ATP6V0A2Q9Y487 856 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 ETV7Q9Y603 341 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 CPQQ9Y646 472 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 PIKFYVEQ9Y2I7 2098 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 CHD7Q9P2D1 2997 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 GON4LQ3T8J9 2241 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 GAKO14976 1311 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM186AA6NE01 2351 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 SPTBN5Q9NRC6 3674 aaKnown RBP0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 USP24Q9UPU5 2620 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 DOPEY2Q9Y3R5 2298 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 SDK2Q58EX2 2172 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 TRANK1O15050 2925 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ARHGAP21Q5T5U3 1957 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 CACNA1CQ13936 2221 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 CABIN1Q9Y6J0 2220 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 DNAH12Q6ZR08 3092 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 LAMA3Q16787 3333 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 KMT2BQ9UMN6 2715 aaPredicted RBP0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 A0A0B4J203 849 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 IGHV3-38A0A0C4DH36 116 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ILVBLA1L0T0 632 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 MAGEB16A2A368 324 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 OR5H15A6NDH6 313 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ANKDD1BA6NHY2 528 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ANHXE9PGG2 379 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 LMO7DNF2Z398 122 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 FBP2O00757 339 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 IFIT3O14879 490 aaKnown RBP0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 CHUKO15111 745 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 TLX2O43763 284 aaPredicted RBP0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ATP9AO75110 1047 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ATP6V1G1O75348 118 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 CSO75390 466 aaKnown RBP0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 FRAT2O75474 233 aaPredicted RBP0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 CLN5O75503 358 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 RHBDL1O75783 438 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ANXA9O76027 345 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 NXPH4O95158 308 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ANGPTL1O95841 491 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 PDGFBP01127 241 aaPredicted RBP0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 GH1P01241 217 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ZFYP08048 801 aaPredicted RBP0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 SBK2P0C263 348 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 OR9G9P0C7N8 305 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 C8orf89P0DMQ9 161 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 UMPSP11172 480 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 IL9P15248 144 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 FOSL2P15408 326 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 FERP16591 822 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ADRA2CP18825 462 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 GPX3P22352 226 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ZBTB25P24278 435 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 IL4RP24394 825 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 ACKR3P25106 362 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 LMO2P25791 158 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 PPP2R1BP30154 601 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 SRD5A2P31213 254 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 CTNNB1P35222 781 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 SERPINB6P35237 376 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 BTDP43251 543 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 MAGEB1P43366 347 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 TNNT3P45378 269 aaPredicted RBP0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC1A6P48664 564 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 RPL34P49207 117 aaKnown RBP0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC7A2P52569 658 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 LIMK2P53671 638 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 IST1P53990 364 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 NAGLUP54802 743 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 HMGCS2P54868 508 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 RIPK4P57078 832 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 KCNK10P57789 538 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms