RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ARFGAP2Q8N6H7 521 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 ZFP62Q8NB50 900 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 ADCY4Q8NFM4 1077 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 PAQR8Q8TEZ7 354 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNF75CPQ92670 426 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 MOAP1Q96BY2 351 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 C3orf30Q96M34 536 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 TAAR6Q96RI8 345 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 NUF2Q9BZD4 464 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 BHLHE41Q9C0J9 482 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 C20orf27Q9GZN8 174 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 AKTIPQ9H8T0 292 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 BOKQ9UMX3 212 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 C19orf53Q9UNZ5 99 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 EXO1Q9UQ84 846 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 PRRC2CQ9Y520 2896 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 NBASA2RRP1 2371 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 AKAP10O43572 662 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 ERN1O75460 977 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 SNX4O95219 450 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 TGDSO95455 350 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 CBX6O95503 412 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 NADKO95544 446 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 ABCD3P28288 659 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 MEOX1P50221 254 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 EMDP50402 254 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 PSMD4P55036 377 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 IRX1P78414 480 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 MRPS35P82673 323 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 LRRC74AQ0VAA2 488 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 LTB4RQ15722 352 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 IGFBP7Q16270 282 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 TRMT12Q53H54 448 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 CES4AQ5XG92 561 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 FAM219BQ5XKK7 198 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 TMEM81Q6P7N7 255 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 ZCCHC12Q6PEW1 402 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 BHLHB9Q6PI77 547 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 PAOXQ6QHF9 649 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 FAM47EQ6ZV65 393 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 SLC22A16Q86VW1 577 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 SULF2Q8IWU5 870 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 FAM13CQ8NE31 585 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 VPS37AQ8NEZ2 397 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 ELP4Q96EB1 424 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 C1orf50Q9BV19 199 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 GLIPR2Q9H4G4 154 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 LIN28AQ9H9Z2 209 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 B4GALT7Q9UBV7 327 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 SEC14L3Q9UDX4 400 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 BAIAP2L1Q9UHR4 511 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 NTNG1Q9Y2I2 539 aa12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 GPR55Q9Y2T6 319 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-216ENST00000626000 OR6C70A6NIJ9 312 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 TFECO14948 347 aaPredicted RBP12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 ATP8B1O43520 1251 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 PPM1BO75688 479 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 LRATO95237 230 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 KRT16P08779 473 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 G6PDP11413 515 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 MC3RP41968 323 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 CASP6P55212 293 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 DUSP2Q05923 314 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 PLCXD2Q0VAA5 305 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNF155Q12901 538 aaPredicted RBP12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 SNTA1Q13424 505 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 EFR3AQ14156 821 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 PTGR1Q14914 329 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 EXOSC7Q15024 291 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 CYP27C1Q4G0S4 372 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 FHL5Q5TD97 284 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 C16orf47Q6ZP98 133 aaPredicted RBP12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 LARP4Q71RC2 724 aaKnown RBP eCLIP12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 NUP54Q7Z3B4 507 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 MDGA2Q7Z553 956 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 SLC34A3Q8N130 599 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 EID3Q8N140 333 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 GHDCQ8N2G8 530 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 AMER2Q8N7J2 671 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 OR2M7Q8NG81 312 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 OR7G2Q8NG99 324 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 CLHC1Q8NHS4 586 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 OR5P2Q8WZ92 322 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 KAT2AQ92830 837 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 GFM2Q969S9 779 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 TESCQ96BS2 214 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 ZBTB9Q96C00 473 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 COQ8BQ96D53 544 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 VSTM2LQ96N03 204 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 GPR137Q96N19 417 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 MS4A4EQ96PG1 132 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 ITPAQ9BY32 194 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 DPY30Q9C005 99 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 NXF5Q9H1B4 397 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNF395Q9H8N7 513 aaPredicted RBP12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 Q9N2J8 555 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 MED4Q9NPJ6 270 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 PNPOQ9NVS9 261 aa12.91□□□□□ -0.34
SNRPA1-216ENST00000626000 NTMQ9P121 344 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms