RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 LBX1P52954 281 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 CHRNEQ04844 493 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 TJAP1Q5JTD0 557 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 ZNF425Q6IV72 752 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 ACSM5Q6NUN0 579 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 BHLHB9Q6PI77 547 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 C19orf48Q6RUI8 117 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 AMIGO1Q86WK6 493 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 MORN4Q8NDC4 146 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 OR7D2Q96RA2 312 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 TSSK6Q9BXA6 273 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 HHATLQ9HCP6 504 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 CD93Q9NPY3 652 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 INIPQ9NRY2 104 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 DZANK1Q9NVP4 752 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 GPR55Q9Y2T6 319 aaPredicted RBP11.26□□□□□ -0.61
TP53-227ENST00000622645 SCN3AQ9NY46 2000 aa11.26□□□□□ -0.61
TP53-227ENST00000622645 MDC1Q14676 2089 aaKnown RBP11.26□□□□□ -0.61
TP53-227ENST00000622645 ATG2AQ2TAZ0 1938 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 PRSS38A1L453 326 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 GUCY1B2O75343 617 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 SLITRK5O94991 958 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 CHRM5P08912 532 aaPredicted RBP11.25□□□□□ -0.61
TP53-227ENST00000622645 COL9A1P20849 921 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 MPIP34949 423 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 GIPRP48546 466 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 GINS1Q14691 196 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 TMEM201Q5SNT2 666 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 C11orf74Q86VG3 221 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 VRK2Q86Y07 508 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 MFSD9Q8NBP5 474 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 NUP43Q8NFH3 380 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 ELP4Q96EB1 424 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 TMEM80Q96HE8 168 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 SPATA5L1Q9BVQ7 753 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 TAPBPLQ9BX59 468 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 NXF2Q9GZY0 626 aaKnown RBP11.25□□□□□ -0.61
TP53-227ENST00000622645 LSM2Q9Y333 95 aaKnown RBP11.25□□□□□ -0.61
TP53-227ENST00000622645 WWP2O00308 870 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 CSO75390 466 aaKnown RBP11.25□□□□□ -0.61
TP53-227ENST00000622645 UPK1BO75841 260 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 NTSR1P30989 418 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 CSTF2P33240 577 aaKnown RBP eCLIP11.25□□□□□ -0.61
TP53-227ENST00000622645 PRR5P85299 388 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 HOXC5Q00444 222 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 SHHQ15465 462 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 SPHARQ15513 63 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 ZNF311Q5JNZ3 666 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 MFSD4BQ5TF39 518 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 ANKRD54Q6NXT1 300 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 ENPP7Q6UWV6 458 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 VN1R4Q7Z5H5 301 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 CADM3Q8N126 398 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 OR56A1Q8NGH5 318 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 OR1E3Q8WZA6 343 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 COL26A1Q96A83 441 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 ELSPBP1Q96BH3 223 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 PRRC1Q96M27 445 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 ZNF681Q96N22 645 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 OR2M4Q96R27 311 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 SARGQ9BW04 601 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 PLA2G12AQ9BZM1 189 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 SLC38A1Q9H2H9 487 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 EGLN3Q9H6Z9 239 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 EXOSC4Q9NPD3 245 aaKnown RBP11.25□□□□□ -0.61
TP53-227ENST00000622645 RPL36Q9Y3U8 105 aaKnown RBP11.25□□□□□ -0.61
TP53-227ENST00000622645 COLEC10Q9Y6Z7 277 aa11.25□□□□□ -0.61
TP53-227ENST00000622645 A0A087WUU8 490 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 A0A0G2JPF8 293 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 A0A1W2PQF6 199 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 HNRNPCL2B2RXH8 293 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 HNRNPCL3B7ZW38 293 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 EMC8O43402 210 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 FCMRO60667 390 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 SCG5P05408 212 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 HBQ1P09105 142 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 HNRNPCL4P0DMR1 293 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 GTF2E2P29084 291 aaKnown RBP11.24□□□□□ -0.61
TP53-227ENST00000622645 S100A5P33763 92 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 PCYT1AP49585 367 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 NCF4Q15080 339 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 STEAP3Q658P3 488 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 C1orf94Q6P1W5 598 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 LYSMD2Q8IV50 215 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 PARP16Q8N5Y8 322 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 IL17RCQ8NAC3 791 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 SIMC1Q8NDZ2 872 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 SRFBP1Q8NEF9 429 aaKnown RBP11.24□□□□□ -0.61
TP53-227ENST00000622645 FAM83FQ8NEG4 500 aaPredicted RBP11.24□□□□□ -0.61
TP53-227ENST00000622645 SFXN5Q8TD22 340 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 TSACCQ96A04 125 aaPredicted RBP11.24□□□□□ -0.61
TP53-227ENST00000622645 LRR1Q96L50 414 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 KCNS3Q9BQ31 491 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 CNPPD1Q9BV87 410 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 C1QTNF7Q9BXJ2 289 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 MIR1-1HGQ9H1L0 117 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 KIR3DX1Q9H7L2 352 aa11.24□□□□□ -0.61
TP53-227ENST00000622645 CCDC59Q9P031 241 aaKnown RBP11.24□□□□□ -0.61
TP53-227ENST00000622645 ZNF624Q9P2J8 865 aaPredicted RBP11.24□□□□□ -0.61
TP53-227ENST00000622645 SNX7Q9UNH6 387 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms