RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TP53INP1Q96A56 240 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 GIMAP5Q96F15 307 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 SCMH1Q96GD3 660 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 CCDC28BQ9BUN5 200 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 EPN3Q9H201 632 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 ATAD3AQ9NVI7 634 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 MAP10Q9P2G4 905 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 DCTN4Q9UJW0 460 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 NINQ8N4C6 2090 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 SVILO95425 2214 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 TRAV17A0A0B4J275 112 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 BCAS2O75934 225 aaPredicted RBP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 C6orf47O95873 294 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 MRPL19P49406 292 aaKnown RBP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 GYS2P54840 703 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 CORO7P57737 925 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 HBA1P69905 142 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 OC90Q02509 493 aaPredicted RBP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 NNATQ16517 81 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 GSTA3Q16772 222 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 PGS1Q32NB8 556 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 ZNF791Q3KP31 576 aaPredicted RBP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 FAM174BQ3ZCQ3 159 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 PRR30Q53SZ7 412 aaPredicted RBP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 TMEM156Q8N614 296 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 ZFP28Q8NHY6 868 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 HOXB13Q92826 284 aaPredicted RBP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 FAM120BQ96EK7 910 aaKnown RBP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 BTBD9Q96Q07 612 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 PRPF18Q99633 342 aaKnown RBP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 CXorf36Q9H7Y0 433 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 FOLH1BQ9HBA9 442 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 SH2D2AQ9NP31 389 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 DDX18Q9NVP1 670 aaKnown RBP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 MAPRE3Q9UPY8 281 aa13.21□□□□□ -0.29
CBWD3-217ENST00000621474 GPR55Q9Y2T6 319 aaPredicted RBP13.21□□□□□ -0.29
CBWD3-217ENST00000621474 RNASET2O00584 256 aaKnown RBP13.21□□□□□ -0.3
CBWD3-217ENST00000621474 SLC25A12O75746 678 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 CD1EP15812 388 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 MAP3K8P41279 467 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 KIR3DL1P43629 444 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 DGKQP52824 942 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 CLNS1AP54105 237 aaKnown RBP13.21□□□□□ -0.3
CBWD3-217ENST00000621474 SRSF11Q05519 484 aaKnown RBP13.21□□□□□ -0.3
CBWD3-217ENST00000621474 DPY19L1Q2PZI1 675 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 PAOXQ6QHF9 649 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 IL20RBQ6UXL0 311 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 TMEM64Q6YI46 380 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 WDR53Q7Z5U6 358 aaPredicted RBP13.21□□□□□ -0.3
CBWD3-217ENST00000621474 ANKRD46Q86W74 232 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 CYP4Z2PQ8N1L4 340 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 NATD1Q8N6N6 113 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 ASB15Q8WXK1 588 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 OR5P2Q8WZ92 322 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 MAGED4Q96JG8 741 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 SIKE1Q9BRV8 207 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 FAM53CQ9NYF3 392 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 TAS2R9Q9NYW1 312 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 ZIM2Q9NZV7 527 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 PRODH2Q9UF12 536 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 CFL2Q9Y281 166 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 NTNG1Q9Y2I2 539 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 PCDHGB6Q9Y5F9 930 aa13.21□□□□□ -0.3
CBWD3-217ENST00000621474 A0A0G2JND7 137 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 FRG2CA6NGY1 282 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 A8MVJ9 347 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 ERN1O75460 977 aaKnown RBP13.2□□□□□ -0.3
CBWD3-217ENST00000621474 PGRP06401 933 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 VIMP08670 466 aaKnown RBP13.2□□□□□ -0.3
CBWD3-217ENST00000621474 FBXO45P0C2W1 286 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 DDX5P17844 614 aaKnown RBP13.2□□□□□ -0.3
CBWD3-217ENST00000621474 ABCD3P28288 659 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 GPC1P35052 558 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 PPICP45877 212 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 MLLT10P55197 1068 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 ZNF766Q5HY98 468 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 EXOSC6Q5RKV6 272 aaKnown RBP13.2□□□□□ -0.3
CBWD3-217ENST00000621474 RPUSD3Q6P087 351 aaKnown RBP13.2□□□□□ -0.3
CBWD3-217ENST00000621474 FUNDC1Q8IVP5 155 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 PRR22Q8IZ63 422 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 SLC15A4Q8N697 577 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 SLC22A8Q8TCC7 542 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 SPACA9Q96E40 222 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-217ENST00000621474 LCORQ96JN0 433 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-217ENST00000621474 TAAR6Q96RI8 345 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 ZNF385DQ9H6B1 395 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 HPF1Q9NWY4 346 aa13.2□□□□□ -0.3
CBWD3-217ENST00000621474 COPG1Q9Y678 874 aaKnown RBP13.2□□□□□ -0.3
CBWD3-217ENST00000621474 EIF4E1BA6NMX2 242 aaKnown RBP13.19□□□□□ -0.3
CBWD3-217ENST00000621474 TO15178 435 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 NME2P1O60361 137 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 COQ9O75208 318 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 SLC22A3O75751 556 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 SP1P08047 785 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 ABCB1P08183 1280 aaPredicted RBP13.19□□□□□ -0.3
CBWD3-217ENST00000621474 DRD5P21918 477 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 NME2P22392 152 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 NTRK2Q16620 822 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 HLA-DQA1Q5Y7H0 255 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms