RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ANKRD28O15084 1053 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 DENRO43583 198 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 FGF3P11487 239 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 IL4RP24394 825 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 GSTM2P28161 218 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 OR1E2P47887 323 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 PLGLAQ15195 96 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 C3P1Q6ZMU1 363 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 RAB11FIP2Q7L804 512 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 GPR149Q86SP6 731 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 OR8K3Q8NH51 312 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 UTP23Q9BRU9 249 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 TIMM29Q9BSF4 260 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 POT1Q9NUX5 634 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 MARCH4Q9P2E8 410 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 PSAT1Q9Y617 370 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 GXYLT2A0PJZ3 443 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 BHMG1C9JSJ3 638 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 CD3GP09693 182 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 ZNF888P0CJ79 500 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 ITIH1P19827 911 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 DDCP20711 480 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 VAMP1P23763 118 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 SMAD4Q13485 552 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 TMEM53Q6P2H8 277 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 PAQR7Q86WK9 346 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 IGDCC3Q8IVU1 814 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 BIRC8Q96P09 236 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 BOCQ9BWV1 1114 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 TTTY10Q9BZA0 68 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 ZNF334Q9HCZ1 680 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 TM9SF3Q9HD45 589 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 STOX2Q9P2F5 926 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 MKLN1Q9UL63 735 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 ABCA3Q99758 1704 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 TRBV11-1A0A0K0K1C0 115 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 M0R129 80 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 SULT2B1O00204 365 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 ORC5O43913 435 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 LPLP06858 475 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 RBM34P42696 430 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 NPRL3Q12980 569 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 PTGR1Q14914 329 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 CTC1Q2NKJ3 1217 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 SPATS1Q496A3 300 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 C3orf38Q5JPI3 329 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 C6orf183Q5T699 404 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 HSD11B1LQ7Z5J1 315 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 OR51G2Q8NGK0 314 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 STON2Q8WXE9 905 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 TANKQ92844 425 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 KCNN1Q92952 543 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 PGAP3Q96FM1 320 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 MNTQ99583 582 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 URM1Q9BTM9 101 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 SLC12A9Q9BXP2 914 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 ACTRT3Q9BYD9 372 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 DCSTAMPQ9H295 470 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 CWH43Q9H720 699 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 STARD5Q9NSY2 213 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 GIMAP2Q9UG22 337 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 DHDHQ9UQ10 334 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 VDAC3Q9Y277 283 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 A0A096LPI6 279 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 E7ESA3 106 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 MRPL3P09001 348 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 SLC6A8P48029 635 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 SOX2P48431 317 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 GINS1Q14691 196 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 ATAD3CQ5T2N8 411 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 SLC27A4Q6P1M0 643 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 SYCE2Q6PIF2 218 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 SLC22A16Q86VW1 577 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 UBALD2Q8IYN6 164 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 ZADH2Q8N4Q0 377 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 WDTC1Q8N5D0 677 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 TCEANCQ8N8B7 351 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 KLHDC9Q8NEP7 349 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 LMO3Q8TAP4 145 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 ZBP1Q9H171 429 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 IL26Q9NPH9 171 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 C2orf42Q9NWW7 574 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 MKS1Q9NXB0 559 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 KCMF1Q9P0J7 381 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 HCSTQ9UBK5 93 aa9.3□□□□□ -0.92
CLTCL1-211ENST00000621271 FAAHO00519 579 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 RIDAP52758 137 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 NUDT6P53370 316 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 CLCA4Q14CN2 919 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 GRAMD2AQ8IUY3 354 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 CDRT4Q8N9R6 151 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 RDH14Q9HBH5 336 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 RAB9BQ9NP90 201 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 RDH8Q9NYR8 311 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 SARDHQ9UL12 918 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 ICKQ9UPZ9 632 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 CA5BQ9Y2D0 317 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 CDH10Q9Y6N8 788 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 RNF215Q9Y6U7 377 aa9.29□□□□□ -0.92
CLTCL1-211ENST00000621271 PRAMEF33A0A0G2JMD5 474 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms