RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 UNC119BA6NIH7 251 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 PMM2O15305 246 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 BUD23O43709 281 aaKnown RBP6.86□□□□□ -1.31
COLCA1-205ENST00000620864 TGFB1P01137 390 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 HLA-HP01893 362 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 SERPINA7P05543 415 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 BCHEP06276 602 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 ADRB2P07550 413 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 H2BFMP0C1H6 154 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 MYF5P13349 255 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 RPS10P46783 165 aaKnown RBP6.86□□□□□ -1.31
COLCA1-205ENST00000620864 HK3P52790 923 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 SRPXP78539 464 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 MZT1Q08AG7 82 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 NIPAL4Q0D2K0 466 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 BCL2L15Q5TBC7 163 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 LIPKQ5VXJ0 399 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 B3GLCTQ6Y288 498 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 FAM122BQ7Z309 247 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 KIAA0907Q7Z7F0 614 aaPredicted RBP6.86□□□□□ -1.31
COLCA1-205ENST00000620864 TMPRSS12Q86WS5 348 aa6.86□□□□□ -1.31
COLCA1-205ENST00000620864 TRMT61BQ9BVS5 477 aaKnown RBP6.86□□□□□ -1.31
COLCA1-205ENST00000620864 ZFR2Q9UPR6 939 aaKnown RBP6.86□□□□□ -1.31
COLCA1-205ENST00000620864 CDHR4A6H8M9 788 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 C17orf112F2Z3M2 114 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 JRKO75564 520 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 TOXO94900 526 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 OAS1P00973 400 aaKnown RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 LSSP48449 732 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 AKR1C2P52895 323 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 CLRN1P58418 232 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 DBPQ10586 325 aaPredicted RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 KEAP1Q14145 624 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 CD163Q86VB7 1156 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 Q8N9G6 341 aaPredicted RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 PLPP5Q8NEB5 264 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 OR4K1Q8NGD4 311 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 DNAJC19Q96DA6 116 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 CCM2Q9BSQ5 444 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ST6GALNAC4Q9H4F1 302 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 INPP5EQ9NRR6 644 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 OSER1Q9NX31 292 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 FTSJ1Q9UET6 329 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 GGT3PA6NGU5 568 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 B4DGG1 531 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ANKRD63C9JTQ0 380 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 M0R2N6 131 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 LRCH4O75427 683 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 FAM155BO75949 473 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 EPOP01588 193 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 PROS1P07225 676 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 C8AP07357 584 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 FOXN2P32314 431 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 GGT2P36268 569 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 MAXP61244 160 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ECH1Q13011 328 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 SLC39A5Q6ZMH5 540 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 LINC00299Q6ZSB3 139 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 NAA40Q86UY6 237 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 OR4Q3Q8NH05 313 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 OR56B4Q8NH76 319 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 NFKBIDQ8NI38 313 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 PRODH2Q9UF12 536 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 LTBP3Q9NS15 1303 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 AMY2AP04746 511 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 COX6B1P14854 86 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ACTR1AP61163 376 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 TMEM236Q5W0B7 351 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF783Q6ZMS7 281 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 MINDY1Q8N5J2 469 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 OR13C3Q8NGS6 347 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 WFIKKN2Q8TEU8 576 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ZDHHC1Q8WTX9 485 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 FBXL20Q96IG2 436 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 COG8Q96MW5 612 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 SETD1AO15047 1707 aaKnown RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 SMIM35A0A1B0GVV1 85 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 KRBA1A5PL33 1030 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ARGFXA6NJG6 315 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 EEDO75530 441 aaKnown RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 SPDEFO95238 335 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 NUDT6P53370 316 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 MAP4K2Q12851 820 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ESCO2Q56NI9 601 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 AGAP7PQ5VUJ5 663 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 C6orf89Q6UWU4 347 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 HORMAD2Q8N7B1 307 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 OR7G3Q8NG95 312 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 KCTD12Q96CX2 325 aaKnown RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 RSPRY1Q96DX4 576 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 FAM163AQ96GL9 167 aaPredicted RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 RBCK1Q9BYM8 510 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 C14orf119Q9NWQ9 140 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ZDHHC3Q9NYG2 299 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 DNAJC27Q9NZQ0 273 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 DNMT3AQ9Y6K1 912 aaPredicted RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 TRBV2A0A0J9YWF9 115 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ANKRD28O15084 1053 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms