RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 HMGN2P05204 90 aaKnown RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 MMP11P24347 488 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 HTR1EP28566 365 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 SSTR4P31391 388 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 DLSTP36957 453 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 PLA2G5P39877 138 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 MAP3K8P41279 467 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 FOLR3P41439 243 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 CRATP43155 626 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 PRIM2P49643 509 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 GSK3BP49841 420 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 EMDP50402 254 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 ANXA11P50995 505 aaKnown RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 PGDP52209 483 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 CASP9P55211 416 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 DUSP8Q13202 625 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 EXOSC7Q15024 291 aaKnown RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 ADRM1Q16186 407 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 COX20Q5RI15 118 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 EXOSC6Q5RKV6 272 aaKnown RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 FAM69BQ5VUD6 431 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 MFSD12Q6NUT3 480 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 CDC73Q6P1J9 531 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 NET1Q7Z628 596 aaPredicted RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 IFNEQ86WN2 208 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 HPS6Q86YV9 775 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 C10orf111Q8N326 155 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 IL22RA1Q8N6P7 574 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 RNF148Q8N7C7 305 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 NFAM1Q8NET5 270 aaPredicted RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 TNIP2Q8NFZ5 429 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 OR52R1Q8NGF1 315 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 OR1N1Q8NGS0 311 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 ZNF721Q8TF20 911 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 HOXB13Q92826 284 aaPredicted RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 SLC35A4Q96G79 324 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 FBXL20Q96IG2 436 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 SLC35G5Q96KT7 338 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 ART5Q96L15 291 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 LPAR4Q99677 370 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 WDR77Q9BQA1 342 aaPredicted RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 CNPPD1Q9BV87 410 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 SPATA9Q9BWV2 254 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 ACTRT3Q9BYD9 372 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 ZNF700Q9H0M5 742 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 OR10A5Q9H207 317 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 ALG2Q9H553 416 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 PIF1Q9H611 641 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 THUMPD1Q9NXG2 353 aaKnown RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 GMPR2Q9P2T1 348 aaKnown RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 PRODH2Q9UF12 536 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 SLC7A8Q9UHI5 535 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 BCAP29Q9UHQ4 241 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 KLK13Q9UKR3 277 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 FAF1Q9UNN5 650 aaPredicted RBP7.47□□□□□ -1.21
CPNE3-209ENST00000620393 ERVK-19Q9WJR5 959 aa7.47□□□□□ -1.21
CPNE3-209ENST00000620393 A0A1W2PQ72 361 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 ELOVL7A1L3X0 281 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 SAGE2PA6NJ88 616 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 HMGN4O00479 90 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 ASNA1O43681 348 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 PRAMEF2O60811 474 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 NME6O75414 186 aaPredicted RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 PDE5AO76074 875 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 SORBS2O94875 1100 aaKnown RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 AGR2O95994 175 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 CLPSP04118 112 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 TFPTP0C1Z6 253 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 OR12D1P0DN82 309 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 LIPCP11150 499 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 ETFAP13804 333 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 MSX2P35548 267 aaPredicted RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 MAN2A2P49641 1150 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 SLC37A1P57057 533 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 DSTNP60981 165 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 RPS18P62269 152 aaKnown RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 RPS26P62854 115 aaKnown RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 MS4A2Q01362 244 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 RBBP4Q09028 425 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 TRAP1Q12931 704 aaKnown RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 TRIM25Q14258 630 aaKnown RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 LASP1Q14847 261 aaKnown RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 TGIF1Q15583 401 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 FXNQ16595 210 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 VMACQ2NL98 169 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 GCNT6Q5T4J0 391 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 TNFAIP8L2Q6P589 184 aaPredicted RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 ERICH5Q6P6B1 374 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 PAPD4Q6PIY7 484 aaKnown RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 KIRREL2Q6UWL6 708 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 ANGPTL8Q6UXH0 198 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 NDUFAF7Q7L592 441 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 SZRD1Q7Z422 152 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 PPP1R32Q7Z5V6 425 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 PTRH1Q86Y79 214 aaKnown RBP7.46□□□□□ -1.22
CPNE3-209ENST00000620393 PTOV1Q86YD1 416 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 ZZZ3Q8IYH5 903 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 METTL25Q8N6Q8 603 aa7.46□□□□□ -1.22
CPNE3-209ENST00000620393 HORMAD2Q8N7B1 307 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms