RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 APOBEC3BQ9UH17 382 aaKnown RBP10.55□□□□□ -0.72
TP53-223ENST00000618944 PCDHGB6Q9Y5F9 930 aa10.55□□□□□ -0.72
TP53-223ENST00000618944 COL4A3Q01955 1670 aa10.55□□□□□ -0.72
TP53-223ENST00000618944 ATG2BQ96BY7 2078 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 KIAA1549LQ6ZVL6 1849 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TBC1D3DA0A087WVF3 549 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TBC1D3IA0A087WXS9 549 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TBC1D3EA0A087X179 549 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TBC1D3KA0A087X1G2 549 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TBC1D3FA6NER0 549 aaPredicted RBP10.54□□□□□ -0.72
TP53-223ENST00000618944 CPSF4LA6NMK7 179 aaKnown RBP10.54□□□□□ -0.72
TP53-223ENST00000618944 TBC1D3LB9A6J9 549 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 KCNK2O95069 426 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 APODP05090 189 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TBC1D3HP0C7X1 549 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 C5AR1P21730 350 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 GDI1P31150 447 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TAS2R41P59536 307 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 RHAGQ02094 409 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 RPE65Q16518 533 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 ZNF311Q5JNZ3 666 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 CLEC12AQ5QGZ9 265 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TBC1D3GQ6DHY5 549 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TBC1D3CQ6IPX1 549 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 FBXO46Q6PJ61 603 aaPredicted RBP10.54□□□□□ -0.72
TP53-223ENST00000618944 FAM92BQ6ZTR7 304 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 USP30Q70CQ3 517 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 SHFQ7M4L6 423 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 C7orf61Q8IZ16 206 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TBC1D3Q8IZP1 549 aaPredicted RBP10.54□□□□□ -0.72
TP53-223ENST00000618944 NANOGP1Q8N7R0 232 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 KCT2Q8NC54 265 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 ABHD8Q96I13 439 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 EHD3Q9NZN3 535 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 ENTPD4Q9Y227 616 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 NTNG1Q9Y2I2 539 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 A3GALT2U3KPV4 340 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 ALPK3Q96L96 1907 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 ISPDA4D126 451 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 LOC110117498-PIK3R3F6TDL0 507 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 AGRPO00253 132 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 EML2O95834 649 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 ASGR2P07307 311 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 PSMA1P25786 263 aaKnown RBP10.54□□□□□ -0.72
TP53-223ENST00000618944 TNFSF8P32971 234 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 ETV5P41161 510 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 CRYBB2P43320 205 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 MAN2A2P49641 1150 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TMED10P49755 219 aaKnown RBP10.54□□□□□ -0.72
TP53-223ENST00000618944 ETV1P50549 477 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TPTEP56180 551 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 DMPKQ09013 629 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 SYT14P1Q58G82 188 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TMEM201Q5SNT2 666 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 C6orf132Q5T0Z8 1188 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 MEDAGQ5VYS4 303 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 DESI1Q6ICB0 168 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 SPATC1Q76KD6 591 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 KIF18BQ86Y91 864 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 MORN4Q8NDC4 146 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 NUP43Q8NFH3 380 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TTLQ8NG68 377 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 OR2L5Q8NG80 312 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 OR52I1Q8NGK6 324 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 BBS10Q8TAM1 723 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 SLC9A6Q92581 669 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 ARMC5Q96C12 935 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 OR7D2Q96RA2 312 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 SPATA5L1Q9BVQ7 753 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 MND1Q9BWT6 205 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 GDE1Q9NZC3 331 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 CNIH4Q9P003 139 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 NDOR1Q9UHB4 597 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 CFL2Q9Y281 166 aa10.54□□□□□ -0.72
TP53-223ENST00000618944 TRANK1O15050 2925 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 A0A087WUU8 490 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 SMIM30A4D0T7 59 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 PLD2O14939 933 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 MYL12BO14950 172 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 PRICKLE3O43900 615 aaPredicted RBP10.53□□□□□ -0.72
TP53-223ENST00000618944 SSX4O60224 188 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 FCMRO60667 390 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 RNGTTO60942 597 aaKnown RBP10.53□□□□□ -0.72
TP53-223ENST00000618944 ADH1BP00325 375 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 POU2F2P09086 479 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 CSNK2A2P19784 350 aaPredicted RBP10.53□□□□□ -0.72
TP53-223ENST00000618944 IGFALSP35858 605 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 AVPR1BP47901 424 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 CLDN2P57739 230 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 RPS21P63220 83 aaKnown RBP10.53□□□□□ -0.72
TP53-223ENST00000618944 ATAT1Q5SQI0 421 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 GDPD3Q7L5L3 318 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 OR4N5Q8IXE1 308 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 OR8H2Q8N162 312 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 ZNF582Q96NG8 517 aaPredicted RBP10.53□□□□□ -0.72
TP53-223ENST00000618944 APOOQ9BUR5 198 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 SP140LQ9H930 580 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 SFXN1Q9H9B4 322 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 ANKMY1Q9P2S6 941 aa10.53□□□□□ -0.72
TP53-223ENST00000618944 CES1P1Q9UKY3 287 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms