RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 NATD1Q8N6N6 113 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 SRFBP1Q8NEF9 429 aaKnown RBP11.67□□□□□ -0.54
CIITA-212ENST00000618207 FNDC11Q9BVV2 318 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 ALOXE3Q9BYJ1 711 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 EVA1BQ9NVM1 165 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 QPCTLQ9NXS2 382 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 EHD3Q9NZN3 535 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 DNAJC27Q9NZQ0 273 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 CES1P1Q9UKY3 287 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 M0R3G1 203 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 DPM1O60762 260 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 APBB3O95704 486 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 EPPINO95925 133 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 CTSEP14091 401 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 MAOBP27338 520 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 NDUFS1P28331 727 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 BMXP51813 675 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 CXCR4P61073 352 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 SOWAHCQ53LP3 525 aaPredicted RBP11.66□□□□□ -0.54
CIITA-212ENST00000618207 TMEM53Q6P2H8 277 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 PRSS48Q7RTY5 328 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 C16orf62Q7Z3J2 963 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 FAM46DQ8NEK8 389 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 SLC37A2Q8TED4 501 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 ELP4Q96EB1 424 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 OR2A5Q96R48 311 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 SLC7A5P2Q9GIP4 190 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 CPNE7Q9UBL6 633 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 CORINQ9Y5Q5 1042 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 SYNDIG1LA6NDD5 238 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 CPSF4LA6NMK7 179 aaKnown RBP11.66□□□□□ -0.54
CIITA-212ENST00000618207 B4DGG1 531 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 FHP07954 510 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 LIPAP38571 399 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 LIMS1P48059 325 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 CDC42P60953 191 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 RPS15AP62244 130 aaKnown RBP11.66□□□□□ -0.54
CIITA-212ENST00000618207 PRR5P85299 388 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 ELOAQ14241 798 aaKnown RBP11.66□□□□□ -0.54
CIITA-212ENST00000618207 MLIPQ5VWP3 458 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 FCRL6Q6DN72 434 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 PODNL1Q6PEZ8 512 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 KLHL35Q6PF15 583 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 SLCO6A1Q86UG4 719 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 IQCHQ86VS3 1027 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 SNX29P2Q8IUI4 249 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 SLC30A8Q8IWU4 369 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 CLIP4Q8N3C7 705 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 DNAJC22Q8N4W6 341 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 OR7G2Q8NG99 324 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 POLR2J3Q9H1A7 115 aaKnown RBP11.66□□□□□ -0.54
CIITA-212ENST00000618207 FBRSQ9HAH7 460 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 ADAP2Q9NPF8 381 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 MMP17Q9ULZ9 603 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 CLCA2Q9UQC9 943 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 GPR55Q9Y2T6 319 aaPredicted RBP11.66□□□□□ -0.54
CIITA-212ENST00000618207 GPC6Q9Y625 555 aaPredicted RBP11.66□□□□□ -0.54
CIITA-212ENST00000618207 MTCH2Q9Y6C9 303 aa11.66□□□□□ -0.54
CIITA-212ENST00000618207 LOC100506127A0A0U1RQW1 187 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.65□□□□□ -0.54
CIITA-212ENST00000618207 H0YGG7 62 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 IGHV4-34P06331 123 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 THEGLP0DJG4 465 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 HMGA2P52926 109 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 VSX2P58304 361 aaPredicted RBP11.65□□□□□ -0.54
CIITA-212ENST00000618207 ARF3P61204 181 aaPredicted RBP11.65□□□□□ -0.54
CIITA-212ENST00000618207 CCINQ13939 588 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 TRMT12Q53H54 448 aaKnown RBP11.65□□□□□ -0.54
CIITA-212ENST00000618207 ZNF311Q5JNZ3 666 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 TRIM69Q86WT6 500 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 SVOPQ8N4V2 548 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 SLC15A4Q8N697 577 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 B3GNT7Q8NFL0 401 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 ADAMTS15Q8TE58 950 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 RSC1A1Q92681 617 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 ABHD8Q96I13 439 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 RNF167Q9H6Y7 350 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 GPN2Q9H9Y4 310 aaPredicted RBP11.65□□□□□ -0.54
CIITA-212ENST00000618207 PSORS1C1Q9UIG5 152 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 A4GNTQ9UNA3 340 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 COL6A3P12111 3177 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 UNC13CQ8NB66 2214 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 CLCA1A8K7I4 914 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 EMC8O43402 210 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 APOL3O95236 402 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 PTHP01270 115 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 TNFP01375 233 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 ADRA2AP08913 450 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 PDX1P52945 283 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 TGM3Q08188 693 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 PSMA8Q8TAA3 256 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 FLVCR1-AS1Q8TAF5 88 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 CDS1Q92903 461 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 GAL3ST3Q96A11 431 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 SLC22A18Q96BI1 424 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 ZNF681Q96N22 645 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 UCK2Q9BZX2 261 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 C3orf14Q9HBI5 128 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 CCNB1IP1Q9NPC3 277 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 TVP23BQ9NYZ1 205 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms