RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 POLR2JP52435 117 aaKnown RBP13.8□□□□□ -0.2
UBXN1-218ENST00000616865 C21orf58P58505 322 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 PMP22Q01453 160 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 PDE7AQ13946 482 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 FAM174BQ3ZCQ3 159 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 MTDHQ86UE4 582 aaKnown RBP13.8□□□□□ -0.2
UBXN1-218ENST00000616865 RIMKLAQ8IXN7 391 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 LRRC25Q8N386 305 aaPredicted RBP13.8□□□□□ -0.2
UBXN1-218ENST00000616865 VPS37AQ8NEZ2 397 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 TESCQ96BS2 214 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 RBM18Q96H35 190 aaKnown RBP13.8□□□□□ -0.2
UBXN1-218ENST00000616865 IMMP1LQ96LU5 166 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 DUSP26Q9BV47 211 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 BHLHE41Q9C0J9 482 aaPredicted RBP13.8□□□□□ -0.2
UBXN1-218ENST00000616865 SAR1AQ9NR31 198 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 CCDC167Q9P0B6 97 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 TEKT2Q9UIF3 430 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 CES1P1Q9UKY3 287 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 EXO1Q9UQ84 846 aaKnown RBP13.8□□□□□ -0.2
UBXN1-218ENST00000616865 CAPN7Q9Y6W3 813 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 CELSR1Q9NYQ6 3014 aa13.8□□□□□ -0.2
UBXN1-218ENST00000616865 TCRBV16S1A1N1A0A5B0 115 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 C9JVG2 144 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 ANKRD28O15084 1053 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 CFLARO15519 480 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 SLC19A2O60779 497 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 IL6P05231 212 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 SLC35E2P0CK97 266 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 LAMP1P11279 417 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 CPMP14384 443 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 NT5EP21589 574 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 GPC1P35052 558 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 STT3AP46977 705 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 MRPL19P49406 292 aaKnown RBP13.79□□□□□ -0.2
UBXN1-218ENST00000616865 NCBP2P52298 156 aaKnown RBP eCLIP13.79□□□□□ -0.2
UBXN1-218ENST00000616865 MANFP55145 182 aaKnown RBP13.79□□□□□ -0.2
UBXN1-218ENST00000616865 ADORA2A-AS1P86434 159 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 MAPRE2Q15555 327 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 SFT2D3Q587I9 215 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 SPANXN4Q5MJ08 99 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 ANXA8L1Q5VT79 327 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 FAM180BQ6P0A1 224 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 XKRXQ6PP77 449 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 LANCL3Q6ZV70 420 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 CPEB2Q7Z5Q1 589 aaKnown RBP13.79□□□□□ -0.2
UBXN1-218ENST00000616865 ANKRD37Q7Z713 158 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 CCDC116Q8IYX3 515 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 CPSF7Q8N684 471 aaKnown RBP13.79□□□□□ -0.2
UBXN1-218ENST00000616865 OR9I1Q8NGQ6 314 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 ZBED6CLQ96FA7 236 aaPredicted RBP13.79□□□□□ -0.2
UBXN1-218ENST00000616865 ZNF764Q96H86 408 aaPredicted RBP13.79□□□□□ -0.2
UBXN1-218ENST00000616865 TEX37Q96LM6 180 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 TRIM8Q9BZR9 551 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 NMUR2Q9GZQ4 415 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 ADAP2Q9NPF8 381 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 TMEM45AQ9NWC5 275 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 TAS2R7Q9NYW3 318 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 PCDHGB4Q9UN71 923 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 CLCA3PQ9Y6N3 262 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 DCHS2Q6V1P9 2916 aa13.79□□□□□ -0.2
UBXN1-218ENST00000616865 IGKV3D-11A0A0A0MRZ8 115 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 A0A1W2PRB8 838 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 CCDC154A6NI56 674 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 IL12AP29459 219 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 ADSLP30566 484 aaPredicted RBP13.78□□□□□ -0.2
UBXN1-218ENST00000616865 DGKQP52824 942 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 CASP6P55212 293 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 KLF10Q13118 480 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 ZNF750Q32MQ0 723 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 TIGD2Q4W5G0 525 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 ZNF385BQ569K4 471 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 ZNF766Q5HY98 468 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 OR4F3Q6IEY1 312 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 ST13P4Q8IZP2 240 aaPredicted RBP13.78□□□□□ -0.2
UBXN1-218ENST00000616865 NUDT8Q8WV74 236 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 CIDECQ96AQ7 238 aaPredicted RBP13.78□□□□□ -0.2
UBXN1-218ENST00000616865 PPWD1Q96BP3 646 aaKnown RBP13.78□□□□□ -0.2
UBXN1-218ENST00000616865 COQ8BQ96D53 544 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 CNRIP1Q96F85 164 aaPredicted RBP13.78□□□□□ -0.2
UBXN1-218ENST00000616865 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 OR52E6Q96RD3 313 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 ZNF385DQ9H6B1 395 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 RMND5AQ9H871 391 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 FAM120CQ9NX05 1096 aaKnown RBP13.78□□□□□ -0.2
UBXN1-218ENST00000616865 STMN3Q9NZ72 180 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 ARMCX1Q9P291 453 aa13.78□□□□□ -0.2
UBXN1-218ENST00000616865 MYO1GB0I1T2 1018 aa13.77□□□□□ -0.21
UBXN1-218ENST00000616865 TGFBR3LH3BV60 316 aa13.77□□□□□ -0.21
UBXN1-218ENST00000616865 SLC22A2O15244 555 aa13.77□□□□□ -0.21
UBXN1-218ENST00000616865 SEC24DO94855 1032 aaPredicted RBP13.77□□□□□ -0.21
UBXN1-218ENST00000616865 PGRP06401 933 aa13.77□□□□□ -0.21
UBXN1-218ENST00000616865 EFNA1P20827 205 aaPredicted RBP13.77□□□□□ -0.21
UBXN1-218ENST00000616865 AGAP20933 346 aa13.77□□□□□ -0.21
UBXN1-218ENST00000616865 IGLV3-21P80748 117 aaPredicted RBP13.77□□□□□ -0.21
UBXN1-218ENST00000616865 HSPB3Q12988 150 aa13.77□□□□□ -0.21
UBXN1-218ENST00000616865 ELAVL1Q15717 326 aaKnown RBP13.77□□□□□ -0.21
UBXN1-218ENST00000616865 C3AR1Q16581 482 aa13.77□□□□□ -0.21
UBXN1-218ENST00000616865 PLAG1Q6DJT9 500 aa13.77□□□□□ -0.21
UBXN1-218ENST00000616865 PAPD4Q6PIY7 484 aaKnown RBP13.77□□□□□ -0.21
UBXN1-218ENST00000616865 GK5Q6ZS86 529 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms