RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ZNF267Q14586 743 aaPredicted RBP17.4■□□□□ 0.38
CDX1-202ENST00000616154 NTRK2Q16620 822 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 CCDC153Q494R4 210 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 GPRIN3Q6ZVF9 776 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 COMMD6Q7Z4G1 85 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 DOK4Q8TEW6 326 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 SELENOMQ8WWX9 145 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 RIT1Q92963 219 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 CCDC126Q96EE4 140 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 ALKBH4Q9NXW9 302 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 B4GALT7Q9UBV7 327 aa17.4■□□□□ 0.38
CDX1-202ENST00000616154 SERTM1A2A2V5 107 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 MANBAO00462 879 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 CLPSP04118 112 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 ENO1P06733 434 aaKnown RBP17.39■□□□□ 0.37
CDX1-202ENST00000616154 KLK1P06870 262 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 CSTF3Q12996 717 aaKnown RBP17.39■□□□□ 0.37
CDX1-202ENST00000616154 TBCELQ5QJ74 424 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 ARSKQ6UWY0 536 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 ZYG11AQ6WRX3 759 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 ULK2Q8IYT8 1036 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 ZNF441Q8N8Z8 693 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 NEIL3Q8TAT5 605 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 RDH11Q8TC12 318 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 SLC6A15Q9H2J7 730 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 GSTO2Q9H4Y5 243 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 NMRK1Q9NWW6 199 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 SLC17A7Q9P2U7 560 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 SLC12A4Q9UP95 1085 aa17.39■□□□□ 0.37
CDX1-202ENST00000616154 ANKRD33BA6NCL7 494 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 WASHC1A8K0Z3 465 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 PGRMC2O15173 223 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 ESRRBO95718 433 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 KRT6AP02538 564 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 GBAP04062 536 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 KRT6BP04259 564 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 KRT6CP48668 564 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 TRA2BP62995 288 aaKnown RBP17.38■□□□□ 0.37
CDX1-202ENST00000616154 PPP2R2AP63151 447 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 WDR53Q7Z5U6 358 aaPredicted RBP17.38■□□□□ 0.37
CDX1-202ENST00000616154 TAGAPQ8N103 731 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 LIX1Q8N485 282 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 CDYL2Q8N8U2 506 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 GBP7Q8N8V2 638 aaPredicted RBP17.38■□□□□ 0.37
CDX1-202ENST00000616154 NRGNQ92686 78 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 C11orf24Q96F05 449 aaPredicted RBP17.38■□□□□ 0.37
CDX1-202ENST00000616154 ZNF597Q96LX8 424 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 DOHHQ9BU89 302 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 C12orf65Q9H3J6 166 aaKnown RBP17.38■□□□□ 0.37
CDX1-202ENST00000616154 CXorf21Q9HAI6 301 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 VPS29Q9UBQ0 182 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 CES1P1Q9UKY3 287 aa17.38■□□□□ 0.37
CDX1-202ENST00000616154 ZNF469Q96JG9 3925 aaPredicted RBP17.38■□□□□ 0.37
CDX1-202ENST00000616154 MAP1AP78559 2803 aaPredicted RBP17.37■□□□□ 0.37
CDX1-202ENST00000616154 GLOD5A6NK44 160 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 HSPB2A8KAH6 182 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 GUCY1B2O75343 617 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 TRIM3O75382 744 aaPredicted RBP17.37■□□□□ 0.37
CDX1-202ENST00000616154 CTAG2O75638 210 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 LRATO95237 230 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 PEX19P40855 299 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 MAPK12P53778 367 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 DNAJB13P59910 316 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 HSPB2Q16082 182 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 SGO1Q5FBB7 561 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 TCHHL1Q5QJ38 904 aaPredicted RBP17.37■□□□□ 0.37
CDX1-202ENST00000616154 CCNYL2Q5T2Q4 361 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 SEM1Q6ZVN7 128 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 NINJ1Q92982 152 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 UCN3Q969E3 161 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 TP53INP1Q96A56 240 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 JSRP1Q96MG2 331 aaPredicted RBP17.37■□□□□ 0.37
CDX1-202ENST00000616154 FAM111AQ96PZ2 611 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 IQCGQ9H095 443 aaKnown RBP17.37■□□□□ 0.37
CDX1-202ENST00000616154 DNAJB12Q9NXW2 375 aaKnown RBP17.37■□□□□ 0.37
CDX1-202ENST00000616154 PCDHA9Q9Y5H5 950 aa17.37■□□□□ 0.37
CDX1-202ENST00000616154 PRRC2AP48634 2157 aaKnown RBP17.37■□□□□ 0.37
CDX1-202ENST00000616154 HRNRQ86YZ3 2850 aaPredicted RBP17.36■□□□□ 0.37
CDX1-202ENST00000616154 ABCA4P78363 2273 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 C2orf92A0A1B0GVN3 265 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 C1orf226A1L170 272 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 CAPN14A8MX76 684 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 TP53I11O14683 189 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 ULK1O75385 1050 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 MYL2P10916 166 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 GDF1P27539 372 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 SSTR4P31391 388 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 TRPC1P48995 793 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 IST1P53990 364 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 WDR4P57081 412 aaKnown RBP17.36■□□□□ 0.37
CDX1-202ENST00000616154 FUT7Q11130 342 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 RPS6KA2Q15349 733 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 FAM219BQ5XKK7 198 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 TMEM198Q66K66 360 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 SLC48A1Q6P1K1 146 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 GALNT18Q6P9A2 607 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 ZZZ3Q8IYH5 903 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 METTL6Q8TCB7 284 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 DIO2Q92813 273 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 TM4SF18Q96CE8 201 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms