RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 HES7Q9BYE0 225 aa15.35■□□□□ 0.05
IRF1-211ENST00000613424 NXF5Q9H1B4 397 aaKnown RBP15.35■□□□□ 0.05
IRF1-211ENST00000613424 EPN3Q9H201 632 aa15.35■□□□□ 0.05
IRF1-211ENST00000613424 CLMPQ9H6B4 373 aa15.35■□□□□ 0.05
IRF1-211ENST00000613424 CCDC134Q9H6E4 229 aa15.35■□□□□ 0.05
IRF1-211ENST00000613424 KLHL1Q9NR64 748 aa15.35■□□□□ 0.05
IRF1-211ENST00000613424 HPF1Q9NWY4 346 aa15.35■□□□□ 0.05
IRF1-211ENST00000613424 ERVK-11Q9UQG0 969 aa15.35■□□□□ 0.05
IRF1-211ENST00000613424 PCDHGB6Q9Y5F9 930 aa15.35■□□□□ 0.05
IRF1-211ENST00000613424 SLC25A12O75746 678 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 IFI6P09912 130 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 DRD5P21918 477 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 IL12AP29459 219 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 CLNS1AP54105 237 aaKnown RBP15.34■□□□□ 0.05
IRF1-211ENST00000613424 WNT3P56703 355 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 DCAF7P61962 342 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 PHC1P78364 1004 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 ZNF791Q3KP31 576 aaPredicted RBP15.34■□□□□ 0.05
IRF1-211ENST00000613424 PDCD4Q53EL6 469 aaKnown RBP15.34■□□□□ 0.05
IRF1-211ENST00000613424 MDGA2Q7Z553 956 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 CISD2Q8N5K1 135 aaKnown RBP15.34■□□□□ 0.05
IRF1-211ENST00000613424 RFWD2Q8NHY2 731 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 TMEM125Q96AQ2 219 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 LCORQ96JN0 433 aaPredicted RBP15.34■□□□□ 0.05
IRF1-211ENST00000613424 C5orf34Q96MH7 638 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 VSTM2LQ96N03 204 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 FOLH1BQ9HBA9 442 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 NPHS2Q9NP85 383 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 DDX18Q9NVP1 670 aaKnown RBP15.34■□□□□ 0.05
IRF1-211ENST00000613424 DCTN4Q9UJW0 460 aa15.34■□□□□ 0.05
IRF1-211ENST00000613424 GPR55Q9Y2T6 319 aaPredicted RBP15.34■□□□□ 0.05
IRF1-211ENST00000613424 E9PBE3 544 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 SLC28A2O43868 658 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 COQ9O75208 318 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 PSMG1O95456 288 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 C6orf47O95873 294 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 VIMP08670 466 aaKnown RBP15.33■□□□□ 0.04
IRF1-211ENST00000613424 CT45A8P0DMV1 189 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 CT45A9P0DMV2 189 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 KIR3DL1P43629 444 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 INPP5JQ15735 1006 aaPredicted RBP15.33■□□□□ 0.04
IRF1-211ENST00000613424 MAPKAPK3Q16644 382 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 CT45A2Q5DJT8 189 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 SPANXN4Q5MJ08 99 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 TMEM64Q6YI46 380 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 ZNF605Q86T29 641 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 NUP43Q8NFH3 380 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 SNRNP40Q96DI7 357 aaKnown RBP15.33■□□□□ 0.04
IRF1-211ENST00000613424 HSPBAP1Q96EW2 488 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 C3orf14Q9HBI5 128 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 SIRT3Q9NTG7 399 aaPredicted RBP15.33■□□□□ 0.04
IRF1-211ENST00000613424 RYDENQ9NUL5 291 aaKnown RBP15.33■□□□□ 0.04
IRF1-211ENST00000613424 FGFR1OP2Q9NVK5 253 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 NTMQ9P121 344 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 NPFFR2Q9Y5X5 522 aa15.33■□□□□ 0.04
IRF1-211ENST00000613424 PRSS51A0A1B0GVH4 220 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 C9JVG2 144 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 RNASET2O00584 256 aaKnown RBP15.32■□□□□ 0.04
IRF1-211ENST00000613424 ACOX3O15254 700 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 CFLARO15519 480 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 EMC8O43402 210 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 NME2P1O60361 137 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 SCN2BO60939 215 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 ERN1O75460 977 aaKnown RBP15.32■□□□□ 0.04
IRF1-211ENST00000613424 SLC22A3O75751 556 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 FBXO45P0C2W1 286 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 NME2P22392 152 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 S100A3P33764 101 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 PRKAG1P54619 331 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 NRG3P56975 720 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 NNATQ16517 81 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 DPY19L1Q2PZI1 675 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 FAM174BQ3ZCQ3 159 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 PRR30Q53SZ7 412 aaPredicted RBP15.32■□□□□ 0.04
IRF1-211ENST00000613424 ANXA8L1Q5VT79 327 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 RTL4Q6ZR62 310 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 GALNTL5Q7Z4T8 443 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 PRR22Q8IZ63 422 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 CLECL1Q8IZS7 167 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 TMEM178AQ8NBL3 297 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 GLB1L3Q8NCI6 653 aaPredicted RBP15.32■□□□□ 0.04
IRF1-211ENST00000613424 PSMA8Q8TAA3 256 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 CPT1CQ8TCG5 803 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 SPACA9Q96E40 222 aaPredicted RBP15.32■□□□□ 0.04
IRF1-211ENST00000613424 SGCZQ96LD1 299 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 BTBD9Q96Q07 612 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 ZBTB18Q99592 522 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 SIKE1Q9BRV8 207 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 TIMMDC1Q9NPL8 285 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 SDR39U1Q9NRG7 319 aaPredicted RBP15.32■□□□□ 0.04
IRF1-211ENST00000613424 ZIM2Q9NZV7 527 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 MAP10Q9P2G4 905 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 SNX8Q9Y5X2 465 aa15.32■□□□□ 0.04
IRF1-211ENST00000613424 COPG1Q9Y678 874 aaKnown RBP15.32■□□□□ 0.04
IRF1-211ENST00000613424 NUP214P35658 2090 aaPredicted RBP15.31■□□□□ 0.04
IRF1-211ENST00000613424 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.31■□□□□ 0.04
IRF1-211ENST00000613424 A0A0G2JND7 137 aa15.31■□□□□ 0.04
IRF1-211ENST00000613424 FRG2CA6NGY1 282 aa15.31■□□□□ 0.04
IRF1-211ENST00000613424 CAPN14A8MX76 684 aa15.31■□□□□ 0.04
IRF1-211ENST00000613424 TO15178 435 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms