RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 FUZQ9BT04 418 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 CNPPD1Q9BV87 410 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 TMEM168Q9H0V1 697 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC25A19Q9HC21 320 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF624Q9P2J8 865 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 MKLN1Q9UL63 735 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 A0A1W2PQF6 199 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 PRSS38A1L453 326 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 P2RX6O15547 441 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 SERPINB7O75635 380 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 CH25HO95992 272 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 LAMP2P13473 410 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 TGM1P22735 817 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 ACSL1P33121 698 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 TRHRP34981 398 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 EIF2DP41214 584 aaKnown RBP13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 MAN2A2P49641 1150 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 SIM1P81133 766 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 GINS1Q14691 196 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 AGERQ15109 404 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 CADM3Q8N126 398 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR2L5Q8NG80 312 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR10G6Q8NH81 332 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 LCN9Q8WX39 176 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 TMEM203Q969S6 136 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 TIMM29Q9BSF4 260 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 TSSK6Q9BXA6 273 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 NT5DC2Q9H857 520 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 HHATLQ9HCP6 504 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 CES1P1Q9UKY3 287 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 YARS2Q9Y2Z4 477 aaKnown RBP13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 FAAHO00519 579 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 PLRG1O43660 514 aaKnown RBP13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 MRPS14O60783 128 aaKnown RBP13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 PDE9AO76083 593 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 KLF8O95600 359 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 HBQ1P09105 142 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 F3P13726 295 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 PVRP15151 417 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 SPNP16150 400 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC15A1P46059 708 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 SRSF5Q13243 272 aaKnown RBP13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 ILKQ13418 452 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF542PQ5EBM4 170 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 CCNJQ5T5M9 372 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLX4IPQ5VYV7 408 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 MRM1Q6IN84 353 aaKnown RBP13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 NIPAL1Q6NVV3 410 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 CASP12Q6UXS9 341 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 PRSS41Q7RTY9 318 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF761Q86XN6 746 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 S100ZQ8WXG8 99 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 FAIM2Q9BWQ8 316 aa13.24□□□□□ -0.29
PCDHGA3-202ENST00000612467 TDRD6O60522 2096 aaKnown RBP13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 PRR19A6NJB7 356 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 CACNB4O00305 520 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 KPNA4O00629 521 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 SSX4O60224 188 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 DRD2P14416 443 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 HOXB2P14652 356 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 CD79BP40259 229 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 HYAL1Q12794 435 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 DEFB134Q4QY38 66 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 USP43Q70EL4 1123 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 PRICKLE2Q7Z3G6 844 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC30A8Q8IWU4 369 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC16A11Q8NCK7 471 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 NUP43Q8NFH3 380 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 DHRS1Q96LJ7 313 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 PSD2Q9BQI7 771 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 MTIF3Q9H2K0 278 aaKnown RBP13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 TPK1Q9H3S4 243 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 SEMA4GQ9NTN9 838 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 OBP2AQ9NY56 170 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 TAS2R7Q9NYW3 318 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 ADAM29Q9UKF5 820 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 ACAD8Q9UKU7 415 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 MGAT4BQ9UQ53 548 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 ENTPD4Q9Y227 616 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 MRPS2Q9Y399 296 aaKnown RBP13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 A0A087WUU8 490 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 A8MVJ9 347 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 CTSVO60911 334 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 PPP2R1BP30154 601 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 ACTR1BP42025 376 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 KHKP50053 298 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 PDX1P52945 283 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 ACTR1AP61163 376 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 MXD1Q05195 221 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 FLYWCH1Q4VC44 716 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 STEAP3Q658P3 488 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 PPP2R2DQ66LE6 453 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 C12orf73Q69YU5 71 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC48A1Q6P1K1 146 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 UTS2BQ765I0 119 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 AMIGO1Q86WK6 493 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 MORN4Q8NDC4 146 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR8D4Q8NGM9 314 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 FAM46AQ96IP4 442 aaKnown RBP13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 CDCA4Q9BXL8 241 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms