RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 SHROOM1Q2M3G4 852 aaPredicted RBP2.94□□□□□ -1.94
HDDC2-207ENST00000608532 EPC2Q52LR7 807 aa2.94□□□□□ -1.94
HDDC2-207ENST00000608532 GPAT3Q53EU6 434 aa2.94□□□□□ -1.94
HDDC2-207ENST00000608532 FAM133BQ5BKY9 247 aaKnown RBP2.94□□□□□ -1.94
HDDC2-207ENST00000608532 CELF3Q5SZQ8 465 aaKnown RBP2.94□□□□□ -1.94
HDDC2-207ENST00000608532 TIFABQ6ZNK6 161 aa2.94□□□□□ -1.94
HDDC2-207ENST00000608532 MCOLN2Q8IZK6 566 aa2.94□□□□□ -1.94
HDDC2-207ENST00000608532 C14orf178Q8N769 122 aaPredicted RBP2.94□□□□□ -1.94
HDDC2-207ENST00000608532 FIBINQ8TAL6 211 aa2.94□□□□□ -1.94
HDDC2-207ENST00000608532 SETD7Q8WTS6 366 aaKnown RBP2.94□□□□□ -1.94
HDDC2-207ENST00000608532 ZNF799Q96GE5 643 aa2.94□□□□□ -1.94
HDDC2-207ENST00000608532 TECTBQ96PL2 329 aa2.94□□□□□ -1.94
HDDC2-207ENST00000608532 CPXM1Q96SM3 734 aa2.94□□□□□ -1.94
HDDC2-207ENST00000608532 TSPY26PQ9H489 355 aa2.94□□□□□ -1.94
HDDC2-207ENST00000608532 ZCCHC3Q9NUD5 404 aaKnown RBP2.94□□□□□ -1.94
HDDC2-207ENST00000608532 APOBEC3BQ9UH17 382 aaKnown RBP2.94□□□□□ -1.94
HDDC2-207ENST00000608532 A0A0J9YVX5 310 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 FAM231BA6NCW3 169 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 H0Y626 953 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 CFLARO15519 480 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 NUDT21O43809 227 aaKnown RBP2.93□□□□□ -1.94
HDDC2-207ENST00000608532 ATP6V1G1O75348 118 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 PROS1P07225 676 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 ZNF32P17041 273 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 PSMB1P20618 241 aaKnown RBP2.93□□□□□ -1.94
HDDC2-207ENST00000608532 RPA1P27694 616 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 TCF7P36402 384 aaPredicted RBP2.93□□□□□ -1.94
HDDC2-207ENST00000608532 UCNP55089 124 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 NME5P56597 212 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 WNT4P56705 351 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 STX1BP61266 288 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 ZNF85Q03923 595 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 NPRL3Q12980 569 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 PRSS42Q7Z5A4 293 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 TGIF2LYQ8IUE0 185 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 PYROXD2Q8N2H3 581 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 NAT8LQ8N9F0 302 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 RAB39BQ96DA2 213 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 IMMP1LQ96LU5 166 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 OSBPL8Q9BZF1 889 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 TRPC4Q9UBN4 977 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 STX8Q9UNK0 236 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 LIPT1Q9Y234 373 aa2.93□□□□□ -1.94
HDDC2-207ENST00000608532 NPIPA5A0A0B4J1W7 369 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 MFSD2BA6NFX1 497 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 NPIPA5E9PKD4 350 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 EEF2KO00418 725 aaKnown RBP2.92□□□□□ -1.94
HDDC2-207ENST00000608532 PDXKO00764 312 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 ZNF263O14978 683 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 IGKV3-11P04433 115 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 OR1D4P47884 311 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 NT5C2P49902 561 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 DIO3P55073 304 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 MSLNQ13421 630 aaPredicted RBP2.92□□□□□ -1.94
HDDC2-207ENST00000608532 FUT11Q495W5 492 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 GLYR1Q49A26 553 aaPredicted RBP2.92□□□□□ -1.94
HDDC2-207ENST00000608532 HECTD3Q5T447 861 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 CADM2Q8N3J6 435 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 OR4F17Q8NGA8 305 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 GDAP1Q8TB36 358 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 LHX4Q969G2 390 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 JAKMIP1Q96N16 626 aaKnown RBP2.92□□□□□ -1.94
HDDC2-207ENST00000608532 OR4F4Q96R69 305 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 APOOQ9BUR5 198 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 HCAR1Q9BXC0 346 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 MMADHCQ9H3L0 296 aaPredicted RBP2.92□□□□□ -1.94
HDDC2-207ENST00000608532 FOXA2Q9Y261 457 aaPredicted RBP2.92□□□□□ -1.94
HDDC2-207ENST00000608532 CA5BQ9Y2D0 317 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 FLVCR1Q9Y5Y0 555 aa2.92□□□□□ -1.94
HDDC2-207ENST00000608532 SLC17A2O00624 439 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 SERF1AO75920 110 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 NOL4O94818 638 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 GSTA1P08263 222 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 HOXC4P09017 264 aaPredicted RBP2.91□□□□□ -1.94
HDDC2-207ENST00000608532 ALDH3B2P48448 385 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 METAP1P53582 386 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 BNIP1Q12981 228 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 KYAT1Q16773 422 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 DCAF4L1Q3SXM0 396 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 KHDRBS2Q5VWX1 349 aaKnown RBP2.91□□□□□ -1.94
HDDC2-207ENST00000608532 SCARA5Q6ZMJ2 495 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 TSEN54Q7Z6J9 526 aaKnown RBP2.91□□□□□ -1.94
HDDC2-207ENST00000608532 RNF138Q8WVD3 245 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 SLC25A38Q96DW6 304 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 TSSK1BQ9BXA7 367 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 TSPYL1Q9H0U9 437 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 ABCG4Q9H172 646 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 PNPLA3Q9NST1 481 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 NARFQ9UHQ1 456 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 FBXW2Q9UKT8 454 aa2.91□□□□□ -1.94
HDDC2-207ENST00000608532 SLC28A1O00337 649 aa2.9□□□□□ -1.95
HDDC2-207ENST00000608532 IGLV1-47P01700 117 aa2.9□□□□□ -1.95
HDDC2-207ENST00000608532 GLULP15104 373 aa2.9□□□□□ -1.95
HDDC2-207ENST00000608532 ACVR1BP36896 505 aa2.9□□□□□ -1.95
HDDC2-207ENST00000608532 TNNT3P45378 269 aaPredicted RBP2.9□□□□□ -1.95
HDDC2-207ENST00000608532 CLPPQ16740 277 aaPredicted RBP2.9□□□□□ -1.95
HDDC2-207ENST00000608532 C11orf88Q6PI97 169 aa2.9□□□□□ -1.95
HDDC2-207ENST00000608532 TMEM270Q6UE05 265 aa2.9□□□□□ -1.95
HDDC2-207ENST00000608532 IGFL3Q6UXB1 125 aa2.9□□□□□ -1.95
HDDC2-207ENST00000608532 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms