RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 CIDECQ96AQ7 238 aaPredicted RBP13.32□□□□□ -0.28
HDDC2-204ENST00000608295 OMA1Q96E52 524 aa13.32□□□□□ -0.28
HDDC2-204ENST00000608295 C11orf24Q96F05 449 aaPredicted RBP13.32□□□□□ -0.28
HDDC2-204ENST00000608295 SGCZQ96LD1 299 aa13.32□□□□□ -0.28
HDDC2-204ENST00000608295 TMEM109Q9BVC6 243 aa13.32□□□□□ -0.28
HDDC2-204ENST00000608295 SLC6A15Q9H2J7 730 aa13.32□□□□□ -0.28
HDDC2-204ENST00000608295 ZNF395Q9H8N7 513 aaPredicted RBP13.32□□□□□ -0.28
HDDC2-204ENST00000608295 C1orf109Q9NX04 203 aa13.32□□□□□ -0.28
HDDC2-204ENST00000608295 CNOT11Q9UKZ1 510 aaKnown RBP13.32□□□□□ -0.28
HDDC2-204ENST00000608295 TRAF6Q9Y4K3 522 aa13.32□□□□□ -0.28
HDDC2-204ENST00000608295 SERTM1A2A2V5 107 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 CDK2AP1O14519 115 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 PRRG2O14669 202 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 ITM2AO43736 263 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 PEX11AO75192 247 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 HSPA4LO95757 839 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 NEFHP12036 1026 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 ETV4P43268 484 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 MASP1P48740 699 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 ADORA2A-AS1P86434 159 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 TOMM20Q15388 145 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 PDCD2Q16342 344 aaPredicted RBP13.31□□□□□ -0.28
HDDC2-204ENST00000608295 NTRK2Q16620 822 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 RFTN2Q52LD8 501 aaPredicted RBP13.31□□□□□ -0.28
HDDC2-204ENST00000608295 ZNF385BQ569K4 471 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 Q6ZSR9 355 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 MRGPRGQ86SM5 289 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 FAM109AQ8N4B1 249 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 RPRMLQ8N4K4 120 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 FBXO30Q8TB52 745 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 MGARPQ8TDB4 240 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 ITLN2Q8WWU7 325 aaPredicted RBP13.31□□□□□ -0.28
HDDC2-204ENST00000608295 RELTQ969Z4 430 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 ZNF597Q96LX8 424 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 RILPQ96NA2 401 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 TRMOQ9BU70 441 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 LDAHQ9H6V9 325 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 ZNF703Q9H7S9 590 aaPredicted RBP13.31□□□□□ -0.28
HDDC2-204ENST00000608295 EML4Q9HC35 981 aaKnown RBP13.31□□□□□ -0.28
HDDC2-204ENST00000608295 GALNT9Q9HCQ5 603 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 EQTNQ9NQ60 294 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 ZNF639Q9UID6 485 aa13.31□□□□□ -0.28
HDDC2-204ENST00000608295 BOKQ9UMX3 212 aaPredicted RBP13.31□□□□□ -0.28
HDDC2-204ENST00000608295 EXO1Q9UQ84 846 aaKnown RBP13.31□□□□□ -0.28
HDDC2-204ENST00000608295 WIPF3A6NGB9 483 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 PRSS44E7EML9 344 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 TP53I11O14683 189 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 GNB5O14775 395 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 LSM1O15116 133 aaKnown RBP13.3□□□□□ -0.28
HDDC2-204ENST00000608295 ERN1O75460 977 aaKnown RBP13.3□□□□□ -0.28
HDDC2-204ENST00000608295 GLSO94925 669 aaPredicted RBP13.3□□□□□ -0.28
HDDC2-204ENST00000608295 TCEA1P23193 301 aaKnown RBP13.3□□□□□ -0.28
HDDC2-204ENST00000608295 GDF1P27539 372 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 RFX3P48380 749 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 TMED10P49755 219 aaKnown RBP13.3□□□□□ -0.28
HDDC2-204ENST00000608295 EMDP50402 254 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 FOXO1Q12778 655 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 NPSR1Q6W5P4 371 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 ZNF551Q7Z340 670 aaPredicted RBP13.3□□□□□ -0.28
HDDC2-204ENST00000608295 DOLPP1Q86YN1 238 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 SLC15A4Q8N697 577 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 FAM57AQ8TBR7 257 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 SPPL2AQ8TCT8 520 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 TMBIM1Q969X1 311 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 TP53INP1Q96A56 240 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 CTHRC1Q96CG8 243 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 LCORQ96JN0 433 aaPredicted RBP13.3□□□□□ -0.28
HDDC2-204ENST00000608295 C3orf30Q96M34 536 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 NODALQ96S42 347 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 GLIPR2Q9H4G4 154 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 METTL7AQ9H8H3 244 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 IL1RL2Q9HB29 575 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 FOLH1BQ9HBA9 442 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 PROK2Q9HC23 129 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 SH2D2AQ9NP31 389 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 PNPLA3Q9NST1 481 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 DDX18Q9NVP1 670 aaKnown RBP13.3□□□□□ -0.28
HDDC2-204ENST00000608295 ZDHHC2Q9UIJ5 367 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 ZNF835Q9Y2P0 537 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 HRH3Q9Y5N1 445 aa13.3□□□□□ -0.28
HDDC2-204ENST00000608295 NCOA6Q14686 2063 aaPredicted RBP13.29□□□□□ -0.28
HDDC2-204ENST00000608295 PDPK1O15530 556 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 UGT2B11O75310 529 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 REM1O75628 298 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 PPM1BO75688 479 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 SNRPB2P08579 225 aaKnown RBP13.29□□□□□ -0.28
HDDC2-204ENST00000608295 BGNP21810 368 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 GRNP28799 593 aaKnown RBP13.29□□□□□ -0.28
HDDC2-204ENST00000608295 GPC1P35052 558 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 MPP2Q14168 576 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 KIAA0040Q15053 153 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 CDSNQ15517 529 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 ZNF585AQ6P3V2 769 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 ARHGAP11AQ6P4F7 1023 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 Q6ZPB1 254 aaPredicted RBP13.29□□□□□ -0.28
HDDC2-204ENST00000608295 SLC44A2Q8IWA5 706 aaPredicted RBP13.29□□□□□ -0.28
HDDC2-204ENST00000608295 CLYBLQ8N0X4 340 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 LIX1Q8N485 282 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 OR4N2Q8NGD1 307 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms