RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 STK32CQ86UX6 486 aa20.17■□□□□ 0.82
USP6NL-204ENST00000606752 VWA5B2Q8N398 1253 aa20.17■□□□□ 0.82
USP6NL-204ENST00000606752 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.17■□□□□ 0.82
USP6NL-204ENST00000606752 SDCCAG3Q96C92 435 aa20.17■□□□□ 0.82
USP6NL-204ENST00000606752 COL21A1Q96P44 957 aa20.17■□□□□ 0.82
USP6NL-204ENST00000606752 CALML5Q9NZT1 146 aa20.17■□□□□ 0.82
USP6NL-204ENST00000606752 SRPK3Q9UPE1 567 aa20.17■□□□□ 0.82
USP6NL-204ENST00000606752 FAM86C2PA6NEL3 165 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 NTN3O00634 580 aaPredicted RBP20.16■□□□□ 0.82
USP6NL-204ENST00000606752 JRKO75564 520 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 DIRAS1O95057 198 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 CD247P20963 164 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 DCTP40126 519 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 SERTAD2Q14140 314 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 OTUD3Q5T2D3 398 aaPredicted RBP20.16■□□□□ 0.82
USP6NL-204ENST00000606752 HEPHL1Q6MZM0 1159 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 WDR53Q7Z5U6 358 aaPredicted RBP20.16■□□□□ 0.82
USP6NL-204ENST00000606752 GALNT12Q8IXK2 581 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 SLC9A6Q92581 669 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 RIT1Q92963 219 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 CNDP2Q96KP4 475 aaKnown RBP20.16■□□□□ 0.82
USP6NL-204ENST00000606752 DGAT2Q96PD7 388 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 SPATA5L1Q9BVQ7 753 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 BTBD2Q9BX70 525 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 LANCL2Q9NS86 450 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 NDUFAF4Q9P032 175 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 SH3GLB1Q9Y371 365 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 LNP1A1A4G5 178 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 OR2W5A6NFC9 320 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 H6PDO95479 791 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 LDOC1O95751 146 aaPredicted RBP20.16■□□□□ 0.82
USP6NL-204ENST00000606752 ITGA2P17301 1181 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 TNFRSF1BP20333 461 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 MAOAP21397 527 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 STT3AP46977 705 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 OR1E2P47887 323 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 EXOSC6Q5RKV6 272 aaKnown RBP20.16■□□□□ 0.82
USP6NL-204ENST00000606752 C6orf52Q5T4I8 152 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 C16orf62Q7Z3J2 963 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 TSEN54Q7Z6J9 526 aaKnown RBP20.16■□□□□ 0.82
USP6NL-204ENST00000606752 HIPK1Q86Z02 1210 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 CDRT4Q8N9R6 151 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 MAGEE2Q8TD90 523 aaPredicted RBP20.16■□□□□ 0.82
USP6NL-204ENST00000606752 OR6C1Q96RD1 312 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 ZNF347Q96SE7 839 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 PIGUQ9H490 435 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 THSD1Q9NS62 852 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 SEC14L3Q9UDX4 400 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 MMACHCQ9Y4U1 282 aa20.16■□□□□ 0.82
USP6NL-204ENST00000606752 MAGED1Q9Y5V3 778 aaPredicted RBP20.16■□□□□ 0.82
USP6NL-204ENST00000606752 WDFY4Q6ZS81 3184 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 SEC16AO15027 2179 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 DLGAP1O14490 977 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 HYAL3O43820 417 aaPredicted RBP20.15■□□□□ 0.82
USP6NL-204ENST00000606752 FESP07332 822 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 S1PR1P21453 382 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 FBLP22087 321 aaKnown RBP20.15■□□□□ 0.82
USP6NL-204ENST00000606752 KCNJ5P48544 419 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 ALDH3A2P51648 485 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 NUBP1P53384 320 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 EXOSC7Q15024 291 aaKnown RBP20.15■□□□□ 0.82
USP6NL-204ENST00000606752 CYP27C1Q4G0S4 372 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 NHSL2Q5HYW2 709 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 SWT1Q5T5J6 900 aaKnown RBP20.15■□□□□ 0.82
USP6NL-204ENST00000606752 RHBDD2Q6NTF9 364 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 TMEM179BQ7Z7N9 219 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 SLITRK4Q8IW52 837 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 PROX1Q92786 737 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 U3KQV3 271 aa20.15■□□□□ 0.82
USP6NL-204ENST00000606752 PRAMEF25A6NGN4 478 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 FLRT2O43155 660 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 COQ9O75208 318 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 CBX7O95931 251 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 ALOX5P09917 674 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 ACP2P11117 423 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 GALNSP34059 522 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 ARHGDIAP52565 204 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 KCNC4Q03721 635 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 PPP1R8Q12972 351 aaKnown RBP20.14■□□□□ 0.81
USP6NL-204ENST00000606752 DAG1Q14118 895 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 DUSP5Q16690 384 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 PHF19Q5T6S3 580 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 LAIR1Q6GTX8 287 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 SHQ1Q6PI26 577 aaKnown RBP20.14■□□□□ 0.81
USP6NL-204ENST00000606752 GPR32P1Q8NGA4 272 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 RHBDD1Q8TEB9 315 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 CDS1Q92903 461 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 PELOQ9BRX2 385 aaKnown RBP20.14■□□□□ 0.81
USP6NL-204ENST00000606752 SLC38A1Q9H2H9 487 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 NECTIN3Q9NQS3 549 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 DUSP22Q9NRW4 184 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 VNN3Q9NY84 501 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 RARRES3Q9UL19 164 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 GPR179Q6PRD1 2367 aa20.14■□□□□ 0.81
USP6NL-204ENST00000606752 MYO15AQ9UKN7 3530 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 D6RAR5 112 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 GP1BAP07359 652 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 ATXN8OSP0DMR3 200 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 DNAJA1P31689 397 aaKnown RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 C1orf189Q5VU69 101 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms