RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 IKZF3Q9UKT9 509 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 NDRG2Q9UN36 371 aaKnown RBP3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 GABRQQ9UN88 632 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 GSTK1Q9Y2Q3 226 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 FIS1Q9Y3D6 152 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 A0A0G2JMZ2 1700 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 LRRC37A2A6NM11 1700 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 LRRC37AA6NMS7 1700 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TP53BP1Q12888 1972 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 A0A087WZ62 844 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 IRGMA1A4Y4 181 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 LCHNA4D1U4 455 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TRAPPC13A5PLN9 417 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMEM150BA6NC51 233 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TRABD2BA6NFA1 517 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 RRN3P2A6NIE6 340 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 LRRC72A6NJI9 287 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ASB14A6NK59 587 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZAR1LA6NP61 321 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MCRIP1C9JLW8 97 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MCIDASD6RGH6 385 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 NEDD8-MDP1E9PL57 170 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 G3V3Q6 166 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TEX46H3BTG2 121 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 DDX39AO00148 427 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CDC7O00311 574 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PDCD5O14737 125 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 FPGTO14772 594 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PPEF2O14830 753 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TO15178 435 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ADAMDEC1O15204 470 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TSC22D2O75157 780 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 RPS6KA4O75676 772 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CDRT1O95170 752 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 HPP00738 406 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 S100A9P06702 114 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 THP07101 528 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 HBQ1P09105 142 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PRF1P14222 555 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF37AP17032 561 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 BPIP17213 487 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TPH1P17752 444 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ERCC2P18074 760 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MAKP20794 623 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 SAT1P21673 171 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 AHCYP23526 432 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PAX6P26367 422 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 EPHA2P29317 976 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PTPN6P29350 595 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PMELP40967 661 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 GDI2P50395 445 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MECP2P51608 486 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 AGFG1P52594 562 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 NUDT6P53370 316 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ACLYP53396 1101 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CRISP3P54108 245 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CLDN8P56748 225 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MTPNP58546 118 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 STARD6P59095 220 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 RAB4BP61018 213 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 DGCR2P98153 550 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TIAL1Q01085 375 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ACSM1Q08AH1 577 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 DYRK1AQ13627 763 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 GPR176Q14439 515 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 GRM7Q14831 915 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 UBXN2BQ14CS0 331 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 EMC2Q15006 297 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PCBP1Q15365 356 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PCBP2Q15366 365 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TOMM20Q15388 145 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TSNQ15631 228 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CDO1Q16878 200 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 EIF2S3LQ2VIR3 472 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 HFEQ30201 348 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PTCHD3Q3KNS1 767 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CDNFQ49AH0 187 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 LBHQ53QV2 105 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CCDC157Q569K6 752 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CDKL4Q5MAI5 379 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 STRIP1Q5VSL9 837 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM160B1Q5W0V3 765 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC25A25Q6KCM7 469 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 BHLHB9Q6PI77 547 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM111BQ6SJ93 734 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM198BQ6UWH4 519 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 WASH2PQ6VEQ5 465 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 UTS2BQ765I0 119 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 BTN2A1Q7KYR7 527 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 DNAJB7Q7Z6W7 309 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ABI3BPQ7Z7G0 1075 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PDZD9Q8IXQ8 264 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 KRT78Q8N1N4 520 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 NKAPQ8N5F7 415 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CAMKK1Q8N5S9 505 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 C7orf57Q8NEG2 295 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ATP6V1C2Q8NEY4 427 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR4C15Q8NGM1 316 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 RAET1EQ8TD07 263 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 SFT2D1Q8WV19 159 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms