RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ABCB1P08183 1280 aaPredicted RBP8.08□□□□□ -1.12
SSBP4-208ENST00000600628 ABCD3P28288 659 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 MPIP34949 423 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 PTGER1P34995 402 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 PTGDSP41222 190 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 CA7P43166 264 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 NR0B1P51843 470 aaKnown RBP8.08□□□□□ -1.12
SSBP4-208ENST00000600628 ABCE1P61221 599 aaKnown RBP8.08□□□□□ -1.12
SSBP4-208ENST00000600628 DCAF7P61962 342 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 MRPS35P82673 323 aaKnown RBP8.08□□□□□ -1.12
SSBP4-208ENST00000600628 ALDH6A1Q02252 535 aaKnown RBP8.08□□□□□ -1.12
SSBP4-208ENST00000600628 BTKQ06187 659 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 C2orf80Q0P641 193 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 CASP8Q14790 479 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 MLC1Q15049 377 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 SPDYAQ5MJ70 313 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 C6orf136Q5SQH8 315 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 SH2D4BQ5SQS7 431 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 SLC22A10Q63ZE4 541 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 NPSR1Q6W5P4 371 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 RGS9BPQ6ZS82 235 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 CAMKMTQ7Z624 323 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 TICAM1Q8IUC6 712 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 FAM98AQ8NCA5 519 aaKnown RBP8.08□□□□□ -1.12
SSBP4-208ENST00000600628 ADCY4Q8NFM4 1077 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 OR9A2Q8NGT5 310 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 HGDQ93099 445 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 HSPBAP1Q96EW2 488 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 FAM173AQ9BQD7 235 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 ITPAQ9BY32 194 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 TTTY12Q9BZ98 90 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 UBQLN3Q9H347 655 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 REEP4Q9H6H4 257 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 ACSS1Q9NUB1 689 aaPredicted RBP8.08□□□□□ -1.12
SSBP4-208ENST00000600628 CNIH4Q9P003 139 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 PLEKHB1Q9UF11 243 aaPredicted RBP8.08□□□□□ -1.12
SSBP4-208ENST00000600628 ATP6V1HQ9UI12 483 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 CFL2Q9Y281 166 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 RAP2CQ9Y3L5 183 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 POLR3HQ9Y535 204 aaPredicted RBP8.08□□□□□ -1.12
SSBP4-208ENST00000600628 NPFFR2Q9Y5X5 522 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 ZNF780BQ9Y6R6 833 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 CSMD2Q7Z408 3487 aa8.08□□□□□ -1.12
SSBP4-208ENST00000600628 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 TMEM120BA0PK00 339 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 FRG2CA6NGY1 282 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 NPIPA5E9PKD4 350 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 UPK1AO00322 258 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 KLF11O14901 512 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 TSPAN2O60636 221 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 BCAS2O75934 225 aaPredicted RBP8.07□□□□□ -1.12
SSBP4-208ENST00000600628 CHEK2O96017 543 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 MYZAPP0CAP1 466 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 ZNF24P17028 368 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 NT5EP21589 574 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 ALDH9A1P49189 494 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 GAS1P54826 345 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 PER3P56645 1201 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 GPR85P60893 370 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 PSG6Q00889 435 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 BST1Q10588 318 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 RPS6KA2Q15349 733 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 CHI3L2Q15782 390 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 IMPG1Q17R60 797 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 EMC4Q5J8M3 183 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 AGBL2Q5U5Z8 902 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 AP1ARQ63HQ0 302 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 SPPL2CQ8IUH8 684 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 TAGAPQ8N103 731 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 ZNF781Q8N8C0 355 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 OR10G3Q8NGC4 313 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 OR52R1Q8NGF1 315 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 OR52N2Q8NGI0 321 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 RAB3IL1Q8TBN0 382 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 SPPL2AQ8TCT8 520 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 EXOSC8Q96B26 276 aaKnown RBP8.07□□□□□ -1.12
SSBP4-208ENST00000600628 COQ8BQ96D53 544 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 ELP4Q96EB1 424 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 GIMAP5Q96F15 307 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 SLC35A4Q96G79 324 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 LCORQ96JN0 433 aaPredicted RBP8.07□□□□□ -1.12
SSBP4-208ENST00000600628 PPP3R2Q96LZ3 170 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 ANGPTL4Q9BY76 406 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 ANKRA2Q9H9E1 313 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 IL1RL2Q9HB29 575 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 SACM1LQ9NTJ5 587 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 QPCTLQ9NXS2 382 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 TUBA8Q9NY65 449 aaPredicted RBP8.07□□□□□ -1.12
SSBP4-208ENST00000600628 PRODH2Q9UF12 536 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 GIMAP2Q9UG22 337 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 BAIAP2L1Q9UHR4 511 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 NPIPA1Q9UND3 350 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 ERVK-11Q9UQG0 969 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 HRH3Q9Y5N1 445 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 ARHGAP21Q5T5U3 1957 aa8.07□□□□□ -1.12
SSBP4-208ENST00000600628 TRGV8A0A0C4DH27 118 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 A1L4Q6 167 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 OR6C70A6NIJ9 312 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 B4DXG7 233 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 ZNF195O14628 629 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms