RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 SIGLEC12Q96PQ1 595 aa13.5□□□□□ -0.25
LTBP4-228ENST00000600499 BARD1Q99728 777 aaKnown RBP13.5□□□□□ -0.25
LTBP4-228ENST00000600499 TRIM4Q9C037 500 aa13.5□□□□□ -0.25
LTBP4-228ENST00000600499 LIN28AQ9H9Z2 209 aaKnown RBP13.5□□□□□ -0.25
LTBP4-228ENST00000600499 NEUROD4Q9HD90 331 aa13.5□□□□□ -0.25
LTBP4-228ENST00000600499 SH2D2AQ9NP31 389 aa13.5□□□□□ -0.25
LTBP4-228ENST00000600499 FAM53CQ9NYF3 392 aa13.5□□□□□ -0.25
LTBP4-228ENST00000600499 TAS2R9Q9NYW1 312 aa13.5□□□□□ -0.25
LTBP4-228ENST00000600499 LRFN1Q9P244 771 aa13.5□□□□□ -0.25
LTBP4-228ENST00000600499 ERVK-11Q9UQG0 969 aa13.5□□□□□ -0.25
LTBP4-228ENST00000600499 NUP214P35658 2090 aaPredicted RBP13.49□□□□□ -0.25
LTBP4-228ENST00000600499 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 PRSS51A0A1B0GVH4 220 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 FRG2CA6NGY1 282 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 E9PBE3 544 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 FBXO45P0C2W1 286 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 CT45A8P0DMV1 189 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 CT45A9P0DMV2 189 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 SOX3P41225 446 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 KIR3DL1P43629 444 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 CDK9P50750 372 aaKnown RBP13.49□□□□□ -0.25
LTBP4-228ENST00000600499 ATP4BP51164 291 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 CT45A2Q5DJT8 189 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 ANXA8L1Q5VT79 327 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 METTL21CQ5VZV1 264 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 CGB2Q6NT52 195 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 TMEM107Q6UX40 140 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 TAGAPQ8N103 731 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 TMEM156Q8N614 296 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 GOLM1Q8NBJ4 401 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 GOT1L1Q8NHS2 421 aaPredicted RBP13.49□□□□□ -0.25
LTBP4-228ENST00000600499 NTNG2Q96CW9 530 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 GIMAP5Q96F15 307 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 ITPAQ9BY32 194 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 MFRPQ9BY79 579 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 NXF5Q9H1B4 397 aaKnown RBP13.49□□□□□ -0.25
LTBP4-228ENST00000600499 ANKRA2Q9H9E1 313 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 FGFR1OP2Q9NVK5 253 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 FAM120CQ9NX05 1096 aaKnown RBP13.49□□□□□ -0.25
LTBP4-228ENST00000600499 MAP10Q9P2G4 905 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 BCAP29Q9UHQ4 241 aa13.49□□□□□ -0.25
LTBP4-228ENST00000600499 EIF4E1BA6NMX2 242 aaKnown RBP13.48□□□□□ -0.25
LTBP4-228ENST00000600499 EMC8O43402 210 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 SLC22A3O75751 556 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 OR6B1O95007 311 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 IL6P05231 212 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 SP1P08047 785 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 PSG6Q00889 435 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 LRRC74AQ0VAA2 488 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 HSPB3Q12988 150 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 NTRK2Q16620 822 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 ZNF766Q5HY98 468 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 SPANXN4Q5MJ08 99 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 HLA-DQA1Q5Y7H0 255 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 SPINK14Q6IE38 97 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 OR4F3Q6IEY1 312 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 SLC25A25Q6KCM7 469 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 TMEM81Q6P7N7 255 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 ZCCHC12Q6PEW1 402 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 MSANTD1Q6ZTZ1 278 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 RFWD2Q8NHY2 731 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 SFXN5Q8TD22 340 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 ASB15Q8WXK1 588 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 MOAP1Q96BY2 351 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 SPACA9Q96E40 222 aaPredicted RBP13.48□□□□□ -0.25
LTBP4-228ENST00000600499 FAM120BQ96EK7 910 aaKnown RBP13.48□□□□□ -0.25
LTBP4-228ENST00000600499 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 GAL3ST4Q96RP7 486 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 LMF2Q9BU23 707 aaKnown RBP13.48□□□□□ -0.25
LTBP4-228ENST00000600499 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.48□□□□□ -0.255e-11■■□□□ 12.5
LTBP4-228ENST00000600499 ZNF385DQ9H6B1 395 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 FOLH1BQ9HBA9 442 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 C3orf14Q9HBI5 128 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 NPHS2Q9NP85 383 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 DDX18Q9NVP1 670 aaKnown RBP13.48□□□□□ -0.25
LTBP4-228ENST00000600499 GIN1Q9NXP7 522 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 BTNL2Q9UIR0 455 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 NPFFR2Q9Y5X5 522 aa13.48□□□□□ -0.25
LTBP4-228ENST00000600499 ASPDHA6ND91 283 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 A8MVJ9 347 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 NME2P1O60361 137 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 ERN1O75460 977 aaKnown RBP13.47□□□□□ -0.25
LTBP4-228ENST00000600499 SLC25A12O75746 678 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 SOX30O94993 753 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 C6orf47O95873 294 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 F10P00742 488 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 PGRP06401 933 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 TROVE2P10155 538 aaKnown RBP eCLIP13.47□□□□□ -0.25
LTBP4-228ENST00000600499 CD46P15529 392 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 NME2P22392 152 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 NR0B1P51843 470 aaKnown RBP13.47□□□□□ -0.25
LTBP4-228ENST00000600499 NRG3P56975 720 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 HBA1P69905 142 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 OC90Q02509 493 aaPredicted RBP13.47□□□□□ -0.25
LTBP4-228ENST00000600499 C19orf57Q0VDD7 668 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 RPS6KA2Q15349 733 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 PGS1Q32NB8 556 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 FAM174BQ3ZCQ3 159 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 RTL4Q6ZR62 310 aa13.47□□□□□ -0.25
LTBP4-228ENST00000600499 CYP4Z2PQ8N1L4 340 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms