RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 PPP1R36Q96LQ0 422 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 SECISBP2Q96T21 854 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 ITPAQ9BY32 194 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 NUF2Q9BZD4 464 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 MEAF6Q9HAF1 191 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 ACSS1Q9NUB1 689 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 DDX18Q9NVP1 670 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 C19orf53Q9UNZ5 99 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 ACOT7O00154 380 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 SCAMP2O15127 329 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 HDAC3O15379 428 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 LBPP18428 481 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 SOX18P35713 384 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 UQCRFS1P47985 274 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 TDGF1P3P51864 188 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 GPR85P60893 370 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 PLGLB1Q02325 96 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 EIF2S3LQ2VIR3 472 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 TBCELQ5QJ74 424 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 ANKRD26P1Q6NSI1 321 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 GFRALQ6UXV0 394 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 ZFP62Q8NB50 900 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 OR2M7Q8NG81 312 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 OR7G2Q8NG99 324 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 PRR7Q8TB68 274 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 LRRC8CQ8TDW0 803 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 ELP4Q96EB1 424 aa15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 NXF5Q9H1B4 397 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 GPR55Q9Y2T6 319 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 HELZ2Q9BYK8 2649 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-212ENST00000596163 FRG2CA6NGY1 282 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 TTC36A6NLP5 189 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 NPIPA5E9PKD4 350 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 TFECO14948 347 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 TO15178 435 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 ERN1O75460 977 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 UNC5CO95185 931 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 G6PDP11413 515 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 MST1P26927 711 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 ABCD3P28288 659 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 KRT20P35900 424 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 MC3RP41968 323 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 CLDN8P56748 225 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 PPP2R2AP63151 447 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 OCRLQ01968 901 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 PLCXD2Q0VAA5 305 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 DUSP8Q13202 625 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 PTGR1Q14914 329 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 RPS6KA2Q15349 733 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 ZNHIT3Q15649 155 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 TMEM107Q6UX40 140 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 NUP54Q7Z3B4 507 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 SLC22A16Q86VW1 577 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 SLC34A3Q8N130 599 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 FBXW8Q8N3Y1 598 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 CEP70Q8NHQ1 597 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 GPR137Q96N19 417 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 BTBD9Q96Q07 612 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 FOLH1BQ9HBA9 442 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 C3orf14Q9HBI5 128 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 NPIPA1Q9UND3 350 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 DTX4Q9Y2E6 619 aa15.92■□□□□ 0.14
SHKBP1-212ENST00000596163 A0A1W2PRB8 838 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 ANKRD33BA6NCL7 494 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 ASNA1O43681 348 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 PPM1BO75688 479 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 CCL3P10147 92 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 KITP10721 976 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 FRKP42685 505 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 C21orf58P58505 322 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 MRPS22P82650 360 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 HSPB3Q12988 150 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 MLC1Q15049 377 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 LSM12Q3MHD2 195 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 ZNF385BQ569K4 471 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 PAOXQ6QHF9 649 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 TMEM64Q6YI46 380 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 ZNF551Q7Z340 670 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 SPATA19Q7Z5L4 167 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 GHDCQ8N2G8 530 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 OR2L13Q8N349 312 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 FAM26EQ8N5C1 309 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 SIMC1Q8NDZ2 872 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 OR10G3Q8NGC4 313 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 OR5M3Q8NGP4 307 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 PIWIL2Q8TC59 973 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 DIO2Q92813 273 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 CIDECQ96AQ7 238 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 COQ8BQ96D53 544 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 MAGED4Q96JG8 741 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 VSTM2LQ96N03 204 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 BHLHE41Q9C0J9 482 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 IL1RL2Q9HB29 575 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 SH2D2AQ9NP31 389 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 DEPPQ9NTK1 212 aa15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 INTS9Q9NV88 658 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 BOKQ9UMX3 212 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-212ENST00000596163 UPK1AO00322 258 aa15.9■□□□□ 0.14
SHKBP1-212ENST00000596163 ABCB7O75027 752 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms