RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GCNT6Q5T4J0 391 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 LAPTM4BQ86VI4 370 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 PTRH1Q86Y79 214 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 TMEM151BQ8IW70 566 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 GALNT6Q8NCL4 622 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 OR7G2Q8NG99 324 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 PMEPA1Q969W9 287 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 FKBP10Q96AY3 582 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 PNO1Q9NRX1 252 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 MAT2BQ9NZL9 334 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 ACTR3BQ9P1U1 418 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 MAGEL2Q9UJ55 1249 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 SNX13Q9Y5W8 968 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 BOD1L1Q8NFC6 3051 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 FLNCQ14315 2725 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 RELNP78509 3460 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 A0A087WV62 115 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 TMEM247A6NEH6 219 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 VSTM2BA6NLU5 285 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 A8MUA0 341 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 C9J4A7 227 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 TGFBR3LH3BV60 316 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 PLOD3O60568 738 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 STK17BO94768 372 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 NCK1P16333 377 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 MVDP53602 400 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 MRPS35P82673 323 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 TXNL4AP83876 142 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 RBBP4Q09028 425 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 MGAT2Q10469 447 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 ZNF267Q14586 743 aaPredicted RBP12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 RTP5Q14D33 572 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 NKG7Q16617 165 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 VMACQ2NL98 169 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 LCN10Q6JVE6 187 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 C6orf15Q6UXA7 325 aaPredicted RBP12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 DGAT2L6Q6ZPD8 337 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 SHISA6Q6ZSJ9 500 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 SPATA24Q86W54 205 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 SPPL2CQ8IUH8 684 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 GALNT12Q8IXK2 581 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 ZZZ3Q8IYH5 903 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 BHLHE22Q8NFJ8 381 aaPredicted RBP12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 METTL21AQ8WXB1 218 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 FIG4Q92562 907 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 TTC9Q92623 222 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 FGF11Q92914 225 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 STMN2Q93045 179 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 ZNF578Q96N58 590 aaPredicted RBP12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 ACTRT3Q9BYD9 372 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 CHST8Q9H2A9 424 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 SLC26A1Q9H2B4 701 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 OR51I1Q9H343 314 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 SOX17Q9H6I2 414 aaPredicted RBP12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 CXorf21Q9HAI6 301 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 GPATCH2Q9NW75 528 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 THUMPD1Q9NXG2 353 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 NTMQ9P121 344 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 CTSFQ9UBX1 484 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 PADI1Q9ULC6 663 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 C19orf53Q9UNZ5 99 aaPredicted RBP12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 SATB2Q9UPW6 733 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 PCDHGA3Q9Y5H0 932 aa12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 COL27A1Q8IZC6 1860 aaPredicted RBP12.19□□□□□ -0.46
SHKBP1-209ENST00000595803 NOTCH2Q04721 2471 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 KNTC1P50748 2209 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 DUXAA6NLW8 204 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 C17orf105B2RV13 164 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 CXCR6O00574 342 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 BRINP1O60477 761 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 COQ9O75208 318 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 ENTPD5O75356 428 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 TNFRSF21O75509 655 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 TNFSF15O95150 251 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 RECKO95980 971 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 HMGN2P05204 90 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 NUDT7P0C024 238 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 CT62P0C5K7 136 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 OR12D1P0DN82 309 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 GGT1P19440 569 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 KHKP50053 298 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 PGDP52209 483 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 TMPRSS3P57727 454 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 RPS26P62854 115 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 CCNIQ14094 377 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 LASP1Q14847 261 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 ZNF630Q2M218 657 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 MRPL14Q6P1L8 145 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 TNFAIP8L2Q6P589 184 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 FAM199XQ6PEV8 388 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 ZCCHC12Q6PEW1 402 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 CYP2R1Q6VVX0 501 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 C10orf111Q8N326 155 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 OR2L13Q8N349 312 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 VWA5B2Q8N398 1253 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 HORMAD2Q8N7B1 307 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 C11orf65Q8NCR3 313 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 SLC26A7Q8TE54 656 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 ADAMTS15Q8TE58 950 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 XAGE5Q8WWM1 108 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms