RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 IL23RQ5VWK5 629 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 HACD2Q6Y1H2 254 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 AMIGO2Q86SJ2 522 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 SIRT6Q8N6T7 355 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 OR14A16Q8NHC5 309 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 C16orf78Q8WTQ4 265 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 DAZLQ92904 295 aaKnown RBP18.28■□□□□ 0.52
LSM4-203ENST00000593829 DGAT2Q96PD7 388 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 PFDN4Q9NQP4 134 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 PTGFRNQ9P2B2 879 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 DLGAP4Q9Y2H0 992 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 BOD1L1Q8NFC6 3051 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 ATRXP46100 2492 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 PRB1P04280 392 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 COX7A2P14406 83 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 STT3AP46977 705 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 PLIN5Q00G26 463 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 KIAA0040Q15053 153 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 NOXRED1Q6NXP6 359 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 ISLR2Q6UXK2 745 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 OR4K14Q8NGD5 310 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 ELP5Q8TE02 316 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 PTPMT1Q8WUK0 201 aaPredicted RBP18.27■□□□□ 0.52
LSM4-203ENST00000593829 TM9SF4Q92544 642 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 PELOQ9BRX2 385 aaKnown RBP18.27■□□□□ 0.52
LSM4-203ENST00000593829 ANKRD60Q9BZ19 345 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 PPIEQ9UNP9 301 aaKnown RBP18.27■□□□□ 0.52
LSM4-203ENST00000593829 MYRFQ9Y2G1 1151 aa18.27■□□□□ 0.52
LSM4-203ENST00000593829 POLR3HQ9Y535 204 aaPredicted RBP18.27■□□□□ 0.52
LSM4-203ENST00000593829 C17orf105B2RV13 164 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 PFDN1O60925 122 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 DRD2P14416 443 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 ZNF763Q0D2J5 394 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 NFATC3Q12968 1075 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 SQLEQ14534 574 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 HEPACAMQ14CZ8 416 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 TMEM198Q66K66 360 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 SLC48A1Q6P1K1 146 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 ANKFN1Q8N957 763 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 LMF1Q96S06 567 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 COQ10BQ9H8M1 238 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 TBCCD1Q9NVR7 557 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 TEKT2Q9UIF3 430 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 CES1P1Q9UKY3 287 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 PSME2Q9UL46 239 aa18.27■□□□□ 0.51
LSM4-203ENST00000593829 LSM1O15116 133 aaKnown RBP18.26■□□□□ 0.51
LSM4-203ENST00000593829 DPM1O60762 260 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 IL3P08700 152 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 SOX11P35716 441 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 ALDH9A1P49189 494 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 KCTD21Q4G0X4 260 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 XKR7Q5GH72 579 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 NXNQ6DKJ4 435 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 IGFL3Q6UXB1 125 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 MMP21Q8N119 569 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 PACRGLQ8N7B6 248 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 TRIML2Q8N7C3 387 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 MORN4Q8NDC4 146 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 ADAMTS16Q8TE57 1224 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 PPWD1Q96BP3 646 aaKnown RBP18.26■□□□□ 0.51
LSM4-203ENST00000593829 NPAS2Q99743 824 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 EPS8L2Q9H6S3 715 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 CD300AQ9UGN4 299 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 WBP11Q9Y2W2 641 aaKnown RBP18.26■□□□□ 0.51
LSM4-203ENST00000593829 TMED5Q9Y3A6 229 aa18.26■□□□□ 0.51
LSM4-203ENST00000593829 DYRK3O43781 588 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 OR10H2O60403 315 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 SLC35E2P0CK97 266 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 MSX2P35548 267 aaPredicted RBP18.25■□□□□ 0.51
LSM4-203ENST00000593829 MFAP5Q13361 173 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 H3F3CQ6NXT2 135 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 C8orf82Q6P1X6 216 aaPredicted RBP18.25■□□□□ 0.51
LSM4-203ENST00000593829 LINC00696Q6ZRV3 163 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 PTRH1Q86Y79 214 aaKnown RBP18.25■□□□□ 0.51
LSM4-203ENST00000593829 APCDD1LQ8NCL9 501 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 NCLNQ969V3 563 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 VMP1Q96GC9 406 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 PPP3R2Q96LZ3 170 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 ZBTB20Q9HC78 741 aaPredicted RBP18.25■□□□□ 0.51
LSM4-203ENST00000593829 DOCK10Q96BY6 2186 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 JUNP05412 331 aaKnown RBP18.25■□□□□ 0.51
LSM4-203ENST00000593829 GPR143P51810 404 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 XKP51811 444 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 RPL38P63173 70 aaKnown RBP18.25■□□□□ 0.51
LSM4-203ENST00000593829 RFTN2Q52LD8 501 aaPredicted RBP18.25■□□□□ 0.51
LSM4-203ENST00000593829 B3GNTL1Q67FW5 361 aaPredicted RBP18.25■□□□□ 0.51
LSM4-203ENST00000593829 PPP4R4Q6NUP7 873 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 IGFL2Q6UWQ7 119 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 SLC5A8Q8N695 610 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 TEX19Q8NA77 164 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 CDC26Q8NHZ8 85 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 C19orf60Q96EN9 201 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 C3orf30Q96M34 536 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 OR8D2Q9GZM6 311 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 OLAHQ9NV23 265 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 ADA2Q9NZK5 511 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 KALRNO60229 2985 aa18.25■□□□□ 0.51
LSM4-203ENST00000593829 ERAL1O75616 437 aaKnown RBP18.24■□□□□ 0.51
LSM4-203ENST00000593829 BMP2P12643 396 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 ATP4BP51164 291 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms