RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 SELENONQ9NZV5 590 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 CA14Q9ULX7 337 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 ENTPD2Q9Y5L3 495 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 A0A0J9YVX5 310 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 CLDN24A6NM45 220 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 OR5K4A6NMS3 321 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 UBE2IP63279 158 aaKnown RBP18.49■□□□□ 0.55
CLIP3-206ENST00000593074 FZD2Q14332 565 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 SMAD2Q15796 467 aaKnown RBP18.49■□□□□ 0.55
CLIP3-206ENST00000593074 ARHGAP22Q7Z5H3 698 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 FAM46DQ8NEK8 389 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 OR6T1Q8NGN1 323 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 ZCCHC10Q8TBK6 192 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 PATE1Q8WXA2 126 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 PRRC1Q96M27 445 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 TRNT1Q96Q11 434 aaKnown RBP18.49■□□□□ 0.55
CLIP3-206ENST00000593074 ACTRT3Q9BYD9 372 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 EQTNQ9NQ60 294 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 MS4A12Q9NXJ0 267 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 CALML5Q9NZT1 146 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 LIPT1Q9Y234 373 aa18.49■□□□□ 0.55
CLIP3-206ENST00000593074 ARHGEF17Q96PE2 2063 aaPredicted RBP18.49■□□□□ 0.55
CLIP3-206ENST00000593074 A0A1W2PPC4 97 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 SYT5O00445 386 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 CTSEP14091 401 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 CPN2P22792 545 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 DEFB134Q4QY38 66 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 TAF8Q7Z7C8 310 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 ZNF687Q8N1G0 1237 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 CAMKVQ8NCB2 501 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 RLN3Q8WXF3 142 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 RSC1A1Q92681 617 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 KAT2AQ92830 837 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 ZFYVE21Q9BQ24 234 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 ANKRA2Q9H9E1 313 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 GIN1Q9NXP7 522 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 DAPP1Q9UN19 280 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 KIR2DS5A0A0G2JLQ3 304 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 A0A0G2JNG1 304 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 C2orf74A8MZ97 194 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 KIR2DS3K7RE56 304 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 B3GALT2O43825 422 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 ZNF217O75362 1048 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 BMXP51813 675 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 RUNX2Q13950 521 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 IRF3Q14653 427 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 KIR2DS5Q14953 304 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 SLX4IPQ5VYV7 408 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 PODNL1Q6PEZ8 512 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 FAM111BQ6SJ93 734 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 PTCHD4Q6ZW05 846 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 ABHD13Q7L211 337 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 LINC00471Q8N535 108 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 KLHDC7BQ96G42 594 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 MS4A4EQ96PG1 132 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 FNDC11Q9BVV2 318 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 GPR27Q9NS67 375 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 EVA1BQ9NVM1 165 aa18.48■□□□□ 0.55
CLIP3-206ENST00000593074 CNOT2Q9NZN8 540 aaKnown RBP18.48■□□□□ 0.55
CLIP3-206ENST00000593074 LOC105369274A0A096LPK9 316 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 LOC102723532A0A0G2JNH3 316 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 STSP08842 583 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 CD36P16671 472 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 ZNF10P21506 573 aaPredicted RBP18.47■□□□□ 0.55
CLIP3-206ENST00000593074 POU1F1P28069 291 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 C12orf73Q69YU5 71 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 KLHL35Q6PF15 583 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 CD300LDQ6UXZ3 194 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 HMGN2P46Q86SG4 172 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 OR4N4Q8N0Y3 316 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 B3GNT7Q8NFL0 401 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 OR7G2Q8NG99 324 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 NDNFQ8TB73 568 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 SLC38A4Q969I6 547 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 SLC22A7Q9Y694 548 aa18.47■□□□□ 0.55
CLIP3-206ENST00000593074 M0R082 166 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 NME6O75414 186 aaPredicted RBP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 SOX14O95416 240 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 LSSP48449 732 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 SNRPGP62308 76 aaKnown RBP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 ST3GAL4Q11206 333 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 TARDBPQ13148 414 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 HEPHL1Q6MZM0 1159 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 MFSD12Q6NUT3 480 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 RNF44Q7L0R7 432 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 ZBTB46Q86UZ6 589 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 OR2L13Q8N349 312 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 STX19Q8N4C7 294 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 OR4K14Q8NGD5 310 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 BAHD1Q8TBE0 780 aaPredicted RBP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 TPSD1Q9BZJ3 242 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 QRSL1Q9H0R6 528 aaKnown RBP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 POLR2J3Q9H1A7 115 aaKnown RBP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 C11orf16Q9NQ32 467 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 CLN6Q9NWW5 311 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 EFCAB10A6NFE3 127 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 TLR4O00206 839 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 TP53P04637 393 aaPredicted RBP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 CELA2BP08218 269 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms