RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CPNE5Q9HCH3 593 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 EQTNQ9NQ60 294 aa14.1□□□□□ -0.15
ATG4D-211ENST00000589753 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.1□□□□□ -0.15
ATG4D-211ENST00000589753 HEMK1Q9Y5R4 338 aaPredicted RBP14.1□□□□□ -0.15
ATG4D-211ENST00000589753 C2orf92A0A1B0GVN3 265 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 CLIC1O00299 241 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 NME6O75414 186 aaPredicted RBP14.09□□□□□ -0.15
ATG4D-211ENST00000589753 ZFAND5O76080 213 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 KRT75O95678 551 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 T-ENOLP0DO92 83 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 ITGAMP11215 1152 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 PRIM2P49643 509 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 VAC14Q08AM6 782 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 ZNF155Q12901 538 aaPredicted RBP14.09□□□□□ -0.15
ATG4D-211ENST00000589753 CAPRIN1Q14444 709 aaKnown RBP14.09□□□□□ -0.15
ATG4D-211ENST00000589753 MYBPC3Q14896 1274 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 EBPQ15125 230 aaKnown RBP14.09□□□□□ -0.15
ATG4D-211ENST00000589753 HLA-DQA1Q5Y7H0 255 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 MFSD12Q6NUT3 480 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 JMJD6Q6NYC1 403 aaPredicted RBP14.09□□□□□ -0.15
ATG4D-211ENST00000589753 ZCCHC12Q6PEW1 402 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 HACD2Q6Y1H2 254 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 OR5L2Q8NGL0 311 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 AURKBQ96GD4 344 aaPredicted RBP14.09□□□□□ -0.15
ATG4D-211ENST00000589753 C16orf58Q96GQ5 468 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 THOC3Q96J01 351 aaKnown RBP14.09□□□□□ -0.15
ATG4D-211ENST00000589753 SLC35G5Q96KT7 338 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 GAL3ST4Q96RP7 486 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 ING2Q9H160 280 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 FOLH1BQ9HBA9 442 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 GPATCH2Q9NW75 528 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 FAF1Q9UNN5 650 aaPredicted RBP14.09□□□□□ -0.15
ATG4D-211ENST00000589753 DTX4Q9Y2E6 619 aa14.09□□□□□ -0.15
ATG4D-211ENST00000589753 FXYD1O00168 92 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 PRKNO60260 465 aaPredicted RBP14.08□□□□□ -0.16
ATG4D-211ENST00000589753 C1QCP02747 245 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 KRT16P08779 473 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 MATN1P21941 496 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 PPIBP23284 216 aaKnown RBP14.08□□□□□ -0.16
ATG4D-211ENST00000589753 ITGA3P26006 1051 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 MXRA7P84157 204 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 CHAF1BQ13112 559 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 LASP1Q14847 261 aaKnown RBP14.08□□□□□ -0.16
ATG4D-211ENST00000589753 ZNHIT3Q15649 155 aaPredicted RBP14.08□□□□□ -0.16
ATG4D-211ENST00000589753 RUNDC3AQ59EK9 446 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 IRAK1BP1Q5VVH5 260 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 GALNT16Q8N428 558 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 CDRT4Q8N9R6 151 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 NUBPLQ8TB37 319 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 PNPT1Q8TCS8 783 aaKnown RBP14.08□□□□□ -0.16
ATG4D-211ENST00000589753 JADE3Q92613 823 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 VSTM2LQ96N03 204 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 ANKRD27Q96NW4 1050 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 SLC39A3Q9BRY0 314 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 YIPF4Q9BSR8 244 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 ITPAQ9BY32 194 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 ACTRT3Q9BYD9 372 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 WWTR1Q9GZV5 400 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 LHPPQ9H008 270 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 RAD21L1Q9H4I0 556 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 NCOR2Q9Y618 2525 aa14.08□□□□□ -0.16
ATG4D-211ENST00000589753 TTC36A6NLP5 189 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 A8MUI8 341 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 EVPLLA8MZ36 301 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 EBAG9O00559 213 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 UNC5CO95185 931 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 CASP9P55211 416 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 SOX8P57073 446 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 DCAF7P61962 342 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 RPS26P62854 115 aaKnown RBP14.07□□□□□ -0.16
ATG4D-211ENST00000589753 CDC73Q6P1J9 531 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 WDR53Q7Z5U6 358 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-211ENST00000589753 RNF130Q86XS8 419 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 APLFQ8IW19 511 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-211ENST00000589753 SLC5A8Q8N695 610 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 OR52N2Q8NGI0 321 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 FBXO30Q8TB52 745 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 MIPOL1Q8TD10 442 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 BRIX1Q8TDN6 353 aaKnown RBP14.07□□□□□ -0.16
ATG4D-211ENST00000589753 THAP3Q8WTV1 239 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-211ENST00000589753 SLC9A6Q92581 669 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 HOXB13Q92826 284 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-211ENST00000589753 ADIPOR1Q96A54 375 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 SH3GL1Q99961 368 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 HOPXQ9BPY8 73 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-211ENST00000589753 CPPED1Q9BRF8 314 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-211ENST00000589753 LMF2Q9BU23 707 aaKnown RBP14.07□□□□□ -0.16
ATG4D-211ENST00000589753 CORO2BQ9UQ03 480 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 KCNMB2Q9Y691 235 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 GMEB1Q9Y692 573 aa14.07□□□□□ -0.16
ATG4D-211ENST00000589753 FREM2Q5SZK8 3169 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 TMEM200CA6NKL6 621 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 B2RBV5 119 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 ALOX5P09917 674 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 CT45A8P0DMV1 189 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 CT45A9P0DMV2 189 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 ACP2P11117 423 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 DRD5P21918 477 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 CRATP43155 626 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 MAGEA8P43361 318 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms