RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 COMMD6Q7Z4G1 85 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 OR4K1Q8NGD4 311 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 NFKBIDQ8NI38 313 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 GEMIN6Q8WXD5 167 aaKnown RBP13.79□□□□□ -0.2
CCDC43-203ENST00000588210 SLC38A3Q99624 504 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 EFCAB11Q9BUY7 163 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 OR52A5Q9H2C5 316 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 EHD1Q9H4M9 534 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 CPNE5Q9HCH3 593 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 MYNNQ9NPC7 610 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 DMRT3Q9NQL9 472 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 C1GALT1Q9NS00 363 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 UGT2A1Q9Y4X1 527 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 ADRB1P08588 477 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 XCR1P46094 333 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 IDH2P48735 452 aaKnown RBP13.79□□□□□ -0.2
CCDC43-203ENST00000588210 INSM1Q01101 510 aaPredicted RBP13.79□□□□□ -0.2
CCDC43-203ENST00000588210 ZNF630Q2M218 657 aaPredicted RBP13.79□□□□□ -0.2
CCDC43-203ENST00000588210 CRB2Q5IJ48 1285 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 TRIM40Q6P9F5 258 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 ZNF605Q86T29 641 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 AMER2Q8N7J2 671 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 PSMA8Q8TAA3 256 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 ZNF480Q8WV37 535 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 PPCDCQ96CD2 204 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 INSM2Q96T92 566 aaPredicted RBP13.79□□□□□ -0.2
CCDC43-203ENST00000588210 NIPSNAP1Q9BPW8 284 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 UCK1Q9HA47 277 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 ENOPH1Q9UHY7 261 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 PCDHGA3Q9Y5H0 932 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 ARRDC5A6NEK1 342 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 KDM1AO60341 852 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 C1orf105O95561 183 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 PDHA2P29803 388 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 GRK5P34947 590 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 OR1E2P47887 323 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 PCBP3P57721 371 aaKnown RBP13.78□□□□□ -0.2
CCDC43-203ENST00000588210 OLR1P78380 273 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 CDK6Q00534 326 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 SLBPQ14493 270 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCDC43-203ENST00000588210 MAPK11Q15759 364 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 TOR1AIP1Q5JTV8 583 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 TMPRSS12Q86WS5 348 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 ARMC8Q8IUR7 673 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 LYSMD2Q8IV50 215 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 C9orf43Q8TAL5 461 aaPredicted RBP13.78□□□□□ -0.2
CCDC43-203ENST00000588210 MTERF3Q96E29 417 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 CRELD1Q96HD1 420 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 C12orf66Q96MD2 445 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 PIP5K1AQ99755 562 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 LRRN3Q9H3W5 708 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 PRM3Q9NNZ6 103 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 IMP3Q9NV31 184 aaKnown RBP13.78□□□□□ -0.2
CCDC43-203ENST00000588210 GPR83Q9NYM4 423 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 DYRK1BQ9Y463 629 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 HEBP2Q9Y5Z4 205 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 ASXL3Q9C0F0 2248 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 PIPSLA2A3N6 862 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 NTN3O00634 580 aaPredicted RBP13.78□□□□□ -0.2
CCDC43-203ENST00000588210 DSCR3O14972 297 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 IFNA14P01570 189 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 STSP08842 583 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 ARAFP10398 606 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 CBLP22681 906 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 PRIM2P49643 509 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 HMGA2P52926 109 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 NUDT6P53370 316 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 EPHA4P54764 986 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 FOXC1Q12948 553 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 MPEG1Q2M385 716 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 COLEC12Q5KU26 742 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 FAM71E1Q6IPT2 247 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 ZNF367Q7RTV3 350 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 SLC30A8Q8IWU4 369 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 CACTIN-AS1Q8N1I8 211 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 STX19Q8N4C7 294 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 Q8N9G6 341 aaPredicted RBP13.78□□□□□ -0.2
CCDC43-203ENST00000588210 OR9Q2Q8NGE9 314 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 OR52J3Q8NH60 311 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 C16orf78Q8WTQ4 265 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 ZFPM2Q8WW38 1151 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 CIDECQ96AQ7 238 aaPredicted RBP13.78□□□□□ -0.2
CCDC43-203ENST00000588210 SGPP1Q9BX95 441 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 ZNF556Q9HAH1 456 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 AMBNQ9NP70 447 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 POLE4Q9NR33 117 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 IMPAD1Q9NX62 359 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 ANKMY1Q9P2S6 941 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 ACSL6Q9UKU0 697 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 SH2B3Q9UQQ2 575 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 COLEC10Q9Y6Z7 277 aa13.78□□□□□ -0.2
CCDC43-203ENST00000588210 RP1P56715 2156 aa13.77□□□□□ -0.2
CCDC43-203ENST00000588210 A0A1W2PQM1 296 aa13.77□□□□□ -0.21
CCDC43-203ENST00000588210 LILRA5A6NI73 299 aa13.77□□□□□ -0.21
CCDC43-203ENST00000588210 PTHP01270 115 aa13.77□□□□□ -0.21
CCDC43-203ENST00000588210 C1GALT1C1LP0DN25 315 aa13.77□□□□□ -0.21
CCDC43-203ENST00000588210 NPPBP16860 134 aa13.77□□□□□ -0.21
CCDC43-203ENST00000588210 NDUFS1P28331 727 aa13.77□□□□□ -0.21
CCDC43-203ENST00000588210 SERPINB1P30740 379 aa13.77□□□□□ -0.21
CCDC43-203ENST00000588210 OR1D5P58170 312 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms