RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 CASC3O15234 703 aaKnown RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 HCRTR1O43613 425 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 BRINP1O60477 761 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 PLOD3O60568 738 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 TNFRSF21O75509 655 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 STX11O75558 287 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 PRKD3O94806 890 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 CCNYL3P0C7X3 344 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 HNRNPCL4P0DMR1 293 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 OR12D1P0DN82 309 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 FGF5P12034 268 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 ETS2P15036 469 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 PEX2P28328 305 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 OR1D4P47884 311 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 CASP9P55211 416 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 TPD52P55327 224 aaPredicted RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 RPS26P62854 115 aaKnown RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 SELENOWP63302 87 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 POU6F2P78424 691 aaPredicted RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 MRPS35P82673 323 aaKnown RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 CFHR1Q03591 330 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 GK3PQ14409 553 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 LARS2Q15031 903 aaKnown RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 TAF11Q15544 211 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 ELAVL1Q15717 326 aaKnown RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 LTB4RQ15722 352 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 SYT16Q17RD7 645 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 LRRC36Q1X8D7 754 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 PRICKLE4Q2TBC4 344 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 CYBRD1Q53TN4 286 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 ZNF628Q5EBL2 1059 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 CRB2Q5IJ48 1285 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 COX20Q5RI15 118 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 MFSD12Q6NUT3 480 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 IZUMO2Q6UXV1 221 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 CBLL1Q75N03 491 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 CCDC80Q76M96 950 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 SLC29A4Q7RTT9 530 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 PTOV1Q86YD1 416 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 ZDHHC13Q8IUH4 622 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 SLITRK4Q8IW52 837 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 ADGRG5Q8IZF4 528 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 PACRGLQ8N7B6 248 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 OR7G1Q8NGA0 311 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 OR5D16Q8NGK9 328 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 NETO1Q8TDF5 533 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 GPR151Q8TDV0 419 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 DNAJC9Q8WXX5 260 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 LRTOMTQ8WZ04 291 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 RAB8BQ92930 207 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 MAL2Q969L2 176 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 OTUB1Q96FW1 271 aaPredicted RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 CENPNQ96H22 339 aaPredicted RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 ZNF681Q96N22 645 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 OR7D2Q96RA2 312 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 DOHHQ9BU89 302 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 G6PC3Q9BUM1 346 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 CHID1Q9BWS9 393 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 CHST8Q9H2A9 424 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 SEMA6AQ9H2E6 1030 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 EVA1AQ9H8M9 152 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 KRCC1Q9NPI7 259 aaPredicted RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 POLE3Q9NRF9 147 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 DUSP22Q9NRW4 184 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 PNO1Q9NRX1 252 aaKnown RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 RXFP3Q9NSD7 469 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 GIN1Q9NXP7 522 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 SLC39A1Q9NY26 324 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 MAT2BQ9NZL9 334 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 DNAJB9Q9UBS3 223 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 NKX1-2Q9UD57 310 aaPredicted RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 MKL2Q9ULH7 1088 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 ZNF232Q9UNY5 417 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 C19orf53Q9UNZ5 99 aaPredicted RBP5.79□□□□□ -1.48
LIG3-206ENST00000586058 USP22Q9UPT9 525 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 SATB2Q9UPW6 733 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 IFT52Q9Y366 437 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 HCN4Q9Y3Q4 1203 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 WDR45Q9Y484 360 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 PCDHGA8Q9Y5G5 932 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 UNC80Q8N2C7 3258 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 ASXL3Q9C0F0 2248 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 CABIN1Q9Y6J0 2220 aa5.79□□□□□ -1.48
LIG3-206ENST00000586058 PTPRBP23467 1997 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 SPTBP11277 2137 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 CCDC187A0A096LP49 1063 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 SAC3D1A6NKF1 404 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 OR6C76A6NM76 312 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 C4orf47A7E2U8 309 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 B4E171 279 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 FAM227AF5H4B4 570 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 H3BNX3 289 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 AGRPO00253 132 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 UPK1AO00322 258 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 CLOCKO15516 846 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 PEX1O43933 1283 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 HS6ST1O60243 411 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 PGM3O95394 542 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ALBP02768 609 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 OPN1SWP03999 348 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms