RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 LCORQ96JN0 433 aaPredicted RBP14.97□□□□□ -0.01
ERBB2-222ENST00000584908 BTBD9Q96Q07 612 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 SECISBP2Q96T21 854 aaKnown RBP14.97□□□□□ -0.01
ERBB2-222ENST00000584908 FAM173AQ9BQD7 235 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 ITPAQ9BY32 194 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 THAP1Q9NVV9 213 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 CNIH4Q9P003 139 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 ATP6V1HQ9UI12 483 aa14.97□□□□□ -0.01
ERBB2-222ENST00000584908 C19orf53Q9UNZ5 99 aaPredicted RBP14.97□□□□□ -0.01
ERBB2-222ENST00000584908 GPR55Q9Y2T6 319 aaPredicted RBP14.97□□□□□ -0.01
ERBB2-222ENST00000584908 ANKRD33BA6NCL7 494 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 FRG2CA6NGY1 282 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 KLF11O14901 512 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 PDPK1O15530 556 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 P04436 131 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 STSP08842 583 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 ABCD3P28288 659 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 RPL3P39023 403 aaKnown RBP14.96□□□□□ -0.01
ERBB2-222ENST00000584908 C21orf58P58505 322 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 GPR85P60893 370 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 PSPHP78330 225 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 EMX2Q04743 252 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 SRSF11Q05519 484 aaKnown RBP14.96□□□□□ -0.01
ERBB2-222ENST00000584908 FOXO1Q12778 655 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 MAD2L1Q13257 205 aaPredicted RBP14.96□□□□□ -0.01
ERBB2-222ENST00000584908 RPS6KA2Q15349 733 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 HYAL4Q2M3T9 481 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 ZNF385BQ569K4 471 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 GK5Q6ZS86 529 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 R3HCC1LQ7Z5L2 792 aaKnown RBP14.96□□□□□ -0.01
ERBB2-222ENST00000584908 TRIM42Q8IWZ5 723 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 OR2L13Q8N349 312 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 LIX1Q8N485 282 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 FNDC5Q8NAU1 212 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 PRR7Q8TB68 274 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 GFM2Q969S9 779 aaKnown RBP14.96□□□□□ -0.01
ERBB2-222ENST00000584908 PPCDCQ96CD2 204 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 NTNG2Q96CW9 530 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 VSTM2LQ96N03 204 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 PROK2Q9HC23 129 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 ACSS1Q9NUB1 689 aaPredicted RBP14.96□□□□□ -0.01
ERBB2-222ENST00000584908 SEC14L3Q9UDX4 400 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 HECTD1Q9ULT8 2610 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 ZNF407Q9C0G0 2248 aa14.96□□□□□ -0.01
ERBB2-222ENST00000584908 SPTBN1Q01082 2364 aaKnown RBP14.96□□□□□ -0.02
ERBB2-222ENST00000584908 DNAJC13O75165 2243 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 A0A0G2JMM0 328 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 A0A1W2PPB8 328 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 A0A1W2PRS3 328 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 PINLYPA6NC86 204 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 KIR3DP1A8MWS1 328 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 SCAMP2O15127 329 aaKnown RBP14.95□□□□□ -0.02
ERBB2-222ENST00000584908 AKAP10O43572 662 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 ASNA1O43681 348 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 GLSO94925 669 aaPredicted RBP14.95□□□□□ -0.02
ERBB2-222ENST00000584908 UNC5CO95185 931 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 LRATO95237 230 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 CT45A8P0DMV1 189 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 CT45A9P0DMV2 189 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 OCRLQ01968 901 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 PTGR1Q14914 329 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 PDCD2Q16342 344 aaPredicted RBP14.95□□□□□ -0.02
ERBB2-222ENST00000584908 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.95□□□□□ -0.02
ERBB2-222ENST00000584908 TTMPQ5BVD1 217 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 CT45A2Q5DJT8 189 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 IL23RQ5VWK5 629 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 ATG16L1Q676U5 607 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 TMEM81Q6P7N7 255 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 GFRALQ6UXV0 394 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 RGS9BPQ6ZS82 235 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 RIMKLAQ8IXN7 391 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 OR10G3Q8NGC4 313 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 CLHC1Q8NHS4 586 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 MGARPQ8TDB4 240 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 ELP4Q96EB1 424 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 C1orf50Q9BV19 199 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 MANSC1Q9H8J5 431 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 AKTIPQ9H8T0 292 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 ANKRA2Q9H9E1 313 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 MEAF6Q9HAF1 191 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 PLSCR2Q9NRY7 297 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 TAS2R9Q9NYW1 312 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 NOP53Q9NZM5 478 aaKnown RBP14.95□□□□□ -0.02
ERBB2-222ENST00000584908 NTMQ9P121 344 aa14.95□□□□□ -0.02
ERBB2-222ENST00000584908 CNOT11Q9UKZ1 510 aaKnown RBP14.95□□□□□ -0.02
ERBB2-222ENST00000584908 DIDO1Q9BTC0 2240 aaKnown RBP14.95□□□□□ -0.02
ERBB2-222ENST00000584908 NPIPA5E9PKD4 350 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 UPK1AO00322 258 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 TP53I11O14683 189 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 COQ9O75208 318 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 SEMA7AO75326 666 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 PPM1BO75688 479 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 ABCB1P08183 1280 aaPredicted RBP14.94□□□□□ -0.02
ERBB2-222ENST00000584908 DDX5P17844 614 aaKnown RBP14.94□□□□□ -0.02
ERBB2-222ENST00000584908 HPCAL1P37235 193 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 MC3RP41968 323 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 KCNK10P57789 538 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 MLC1Q15049 377 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 TBCELQ5QJ74 424 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 ANKRD26P1Q6NSI1 321 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms