RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 CAPZA1P52907 286 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 TMEM50BP56557 158 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 KDSRQ06136 332 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 C17orf67Q0P5P2 114 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 RPA4Q13156 261 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 CBX3Q13185 183 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 PLD1Q13393 1074 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 IL11RAQ14626 422 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 IGFBP7Q16270 282 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 ITPRIPL2Q3MIP1 535 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 LINC00303Q3SY05 128 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 ZRANB3Q5FWF4 1079 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 NHSL2Q5HYW2 709 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 LYSMD4Q5XG99 296 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 SEL1L3Q68CR1 1132 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 KIAA0930Q6ICG6 404 aaPredicted RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 GALNT17Q6IS24 598 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 SLC8B1Q6J4K2 584 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 CWC27Q6UX04 472 aaKnown RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 RBPMS2Q6ZRY4 209 aaKnown RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 ADCK2Q7Z695 626 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 RALGPS2Q86X27 583 aaPredicted RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 ERICH1Q86X53 443 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 SIX6OS1Q8N1H7 587 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 IQUBQ8NA54 791 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 ATAD1Q8NBU5 361 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 KCNE4Q8WWG9 221 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 N4BP2L2Q92802 583 aaPredicted RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 MOAP1Q96BY2 351 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 CYYR1Q96J86 154 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 C16orf45Q96MC5 204 aaPredicted RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 SRSF8Q9BRL6 282 aaKnown RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 ZNF577Q9BSK1 485 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 UBAC1Q9BSL1 405 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 LINC00597Q9H2U6 94 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 PLK3Q9H4B4 646 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 C8orf33Q9H7E9 229 aaPredicted RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.24□□□□□ -2.054e-10■□□□□ 11.3
VAPA-208ENST00000584796 ABCB8Q9NUT2 735 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 AKAP7Q9P0M2 348 aaPredicted RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 TBK1Q9UHD2 729 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 IL17BQ9UHF5 180 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 SH3BGRL2Q9UJC5 107 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 CMAHPQ9Y471 501 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 FBN1P35555 2871 aaKnown RBP2.24□□□□□ -2.05
VAPA-208ENST00000584796 LRP4O75096 1905 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 ESPL1Q14674 2120 aa2.24□□□□□ -2.05
VAPA-208ENST00000584796 UNC13CQ8NB66 2214 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 ANKRD36A6QL64 1941 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 NSD1Q96L73 2696 aaPredicted RBP2.23□□□□□ -2.05
VAPA-208ENST00000584796 SYNJ2BP-COX16A0A087WUM0 186 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 LOC102723996A0A087X1L8 192 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 RNF103-CHMP3A0A140T963 221 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 A0A1W2PR77 199 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 A0A1W2PRV1 198 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 HTR3EA5X5Y0 456 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 E7EWF7 191 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 RNF103O00237 685 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 HCRTO43612 131 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 SLC37A4O43826 429 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 RNASEH1O60930 286 aaKnown RBP2.23□□□□□ -2.05
VAPA-208ENST00000584796 TRIM16O95361 564 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 SERPINF2P08697 491 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 HMGA1P17096 107 aaKnown RBP2.23□□□□□ -2.05
VAPA-208ENST00000584796 PRKACGP22612 351 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 GABRR2P28476 465 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 SLC6A6P31641 620 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 MC5RP33032 325 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 CASP3P42574 277 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 MATR3P43243 847 aaKnown RBP eCLIP2.23□□□□□ -2.052e-6■■■■□ 22.8
VAPA-208ENST00000584796 NT5C2P49902 561 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 SLC26A2P50443 739 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 SLC12A3P55017 1021 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 UBASH3AP57075 661 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 KRTAP10-1P60331 282 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 PTENP60484 403 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 POLR2FP61218 127 aaKnown RBP2.23□□□□□ -2.05
VAPA-208ENST00000584796 HTD2P86397 168 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 SPAG1Q07617 926 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 RALGDSQ12967 914 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 RUNX3Q13761 415 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 TRIM29Q14134 588 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 RCN2Q14257 317 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 MELKQ14680 651 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 LASP1Q14847 261 aaKnown RBP2.23□□□□□ -2.05
VAPA-208ENST00000584796 EMC2Q15006 297 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 MAPK6Q16659 721 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 UPP1Q16831 310 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 C15orf32Q32M92 178 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 RNF212Q495C1 297 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 ANKRD20A4Q4UJ75 823 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 HIGD2BQ4VC39 106 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 PDLIM3Q53GG5 364 aaPredicted RBP2.23□□□□□ -2.05
VAPA-208ENST00000584796 ANKRD20A8PQ5CZ79 823 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 IGSF11Q5DX21 431 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 TOR1AIP1Q5JTV8 583 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 ANKRD20A2Q5SQ80 823 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 ANKRD20A1Q5TYW2 823 aa2.23□□□□□ -2.05
VAPA-208ENST00000584796 ANKRD20A3Q5VUR7 823 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms