RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	FAM8A1	Q9UBU6	413 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	CRCT1	Q9UGL9	99 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	ASIC3	Q9UHC3	531 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	ANAPC7	Q9UJX3	599 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	POU2F3	Q9UKI9	436 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	AMFR	Q9UKV5	643 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	PCNX3	Q9H6A9	2034 aa		4.27	□□□□□ -1.73
MSI2-216	ENST00000582772	TCRBV7S2A1N4T	A0A589	114 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	C1orf226	A1L170	272 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	ANKRD62	A6NC57	917 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	CXorf49	A8MYA2	514 aa	Predicted RBP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	MYO1C	O00159	1063 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	PMM2	O15305	246 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	EIF3H	O15372	352 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	CDC123	O75794	336 aa	Predicted RBP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	FTL	P02792	175 aa	Predicted RBP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	MME	P08473	750 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	GSTM1	P09488	218 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	MMP13	P45452	471 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	CCT5	P48643	541 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	AIF1	P55008	147 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	HADHB	P55084	474 aa	Known RBP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	CORO7	P57737	925 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	FMO1	Q01740	532 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	TEK	Q02763	1124 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	GSTM4	Q03013	218 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	SRY	Q05066	204 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	SPOCK1	Q08629	439 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	CUL1	Q13616	776 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	ITGA9	Q13797	1035 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	LAPTM4A	Q15012	233 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	KIAA2026	Q5HYC2	2103 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	SFRP5	Q5T4F7	317 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	ZDHHC20	Q5W0Z9	365 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	DUPD1	Q68J44	220 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	TTC27	Q6P3X3	843 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	C11orf88	Q6PI97	169 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	ZDHHC24	Q6UX98	284 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	NPNT	Q6UXI9	565 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	LRIG3	Q6UXM1	1119 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	SLC46A3	Q7Z3Q1	461 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	STK32C	Q86UX6	486 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	SERPINA9	Q86WD7	417 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	OR4N5	Q8IXE1	308 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	NPW	Q8N729	165 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	PRELID2	Q8N945	189 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	EIF1AD	Q8N9N8	165 aa	Known RBP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	DEFB108B	Q8NET1	73 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	IL17D	Q8TAD2	202 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	FIG4	Q92562	907 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	TBC1D20	Q96BZ9	403 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	SPACA9	Q96E40	222 aa	Predicted RBP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	JSRP1	Q96MG2	331 aa	Predicted RBP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	CAPS2	Q9BXY5	557 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	DPH5	Q9H2P9	285 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	LIN28A	Q9H9Z2	209 aa	Known RBP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	NPHS2	Q9NP85	383 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	NOX4	Q9NPH5	578 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	IL26	Q9NPH9	171 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	METTL5	Q9NRN9	209 aa	Known RBP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	ZDHHC18	Q9NUE0	388 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	MOCS1	Q9NZB8	636 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	TREM2	Q9NZC2	230 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	GRHL1	Q9NZI5	618 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	REV1	Q9UBZ9	1251 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	ZMAT5	Q9UDW3	170 aa	Known RBP	4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	AMACR	Q9UHK6	382 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	ASF1A	Q9Y294	204 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	EMC9	Q9Y3B6	208 aa		4.26	□□□□□ -1.73
MSI2-216	ENST00000582772	POC1B-GALNT4	F8VUJ3	575 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	KLF11	O14901	512 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	WNT9B	O14905	357 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	P4HA2	O15460	535 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	GPR39	O43194	453 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	MAFK	O60675	156 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	SS18L1	O75177	396 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	MYO1D	O94832	1006 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	SNX4	O95219	450 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	GPANK1	O95872	356 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	PLAT	P00750	562 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	FGG	P02679	453 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	SHBG	P04278	402 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	FCGR2A	P12318	317 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	MSH3	P20585	1137 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	COMT	P21964	271 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	IL32	P24001	234 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	CTNNA2	P26232	953 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	HOXD3	P31249	432 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	HMGCL	P35914	325 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	GUCY1A3	Q02108	690 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	EGR3	Q06889	387 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	GRB7	Q14451	532 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	PPA1	Q15181	289 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	EFNB3	Q15768	340 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	CEP85L	Q5SZL2	805 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	SWT1	Q5T5J6	900 aa	Known RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	AGBL2	Q5U5Z8	902 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	C11orf63	Q6NUN7	778 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772		Q6YL49	198 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	HSDL2	Q6YN16	418 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms