RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 VCX3BQ9H321 246 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 MCM8Q9UJA3 840 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 PCDHGB4Q9UN71 923 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 SH2B3Q9UQQ2 575 aa9.62□□□□□ -0.87
SS18-221ENST00000582448 UTP20O75691 2785 aaKnown RBP9.62□□□□□ -0.87
SS18-221ENST00000582448 SPTBN1Q01082 2364 aaKnown RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 A0A096LPI6 279 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 GSAPA4D1B5 854 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 C2orf74A8MZ97 194 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 TOX3O15405 576 aaPredicted RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 DPM1O60762 260 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 GUCY1B2O75343 617 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 BCAS2O75934 225 aaPredicted RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 SORBS2O94875 1100 aaKnown RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 HSD17B1P14061 328 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 NELFEP18615 380 aaKnown RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 SLC6A2P23975 617 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 PSMB5P28074 263 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 AHRP35869 848 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 TRPC1P48995 793 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 C21orf58P58505 322 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 PPP1CAP62136 330 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 RPS15AP62244 130 aaKnown RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 SLC34A1Q06495 639 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 IL10RAQ13651 578 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 GPR18Q14330 331 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 ZNF385BQ569K4 471 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 PAGE3Q5JUK9 113 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 CCNYL2Q5T2Q4 361 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 DEPDC1Q5TB30 811 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 MRM1Q6IN84 353 aaKnown RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 NANOGP8Q6NSW7 305 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 C8orf82Q6P1X6 216 aaPredicted RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 SPATA24Q86W54 205 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 DHFR2Q86XF0 187 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.61□□□□□ -0.87
SS18-221ENST00000582448 METTL4Q8N3J2 472 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 RNF175Q8N4F7 328 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 NATD1Q8N6N6 113 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 ZNF740Q8NDX6 193 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 FDCSPQ8NFU4 85 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 OR8J3Q8NGG0 315 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 GFM2Q969S9 779 aaKnown RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 MTERF3Q96E29 417 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 CGREF1Q99674 301 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 ECSITQ9BQ95 431 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 DPH7Q9BTV6 452 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 THUMPD3Q9BV44 507 aaKnown RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 GPR87Q9BY21 358 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 OR51B5Q9H339 312 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 NANOGQ9H9S0 305 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 UCK1Q9HA47 277 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 SLC52A3Q9NQ40 469 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 MIEF1Q9NQG6 463 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 FAM120CQ9NX05 1096 aaKnown RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 STX18Q9P2W9 335 aaKnown RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 ABCD2Q9UBJ2 740 aa9.61□□□□□ -0.87
SS18-221ENST00000582448 ERRFI1Q9UJM3 462 aaPredicted RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 PCDHGA9Q9Y5G4 932 aaKnown RBP9.61□□□□□ -0.87
SS18-221ENST00000582448 USP9XQ93008 2570 aaPredicted RBP9.6□□□□□ -0.87
SS18-221ENST00000582448 IGHV5-51A0A0C4DH38 117 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 FEZF1A0PJY2 475 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 ZC3H12DA2A288 527 aaKnown RBP9.6□□□□□ -0.87
SS18-221ENST00000582448 OR6C74A6NCV1 312 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 EVPLLA8MZ36 301 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 SAP18O00422 153 aaKnown RBP9.6□□□□□ -0.87
SS18-221ENST00000582448 RFXANKO14593 260 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 SCAMP2O15127 329 aaKnown RBP9.6□□□□□ -0.87
SS18-221ENST00000582448 GSTA4O15217 222 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 NDUFS4O43181 175 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 TBX1O43435 398 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 KRT36O76013 467 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 ETHE1O95571 254 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 BAG2O95816 211 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 KLK1P06870 262 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 ZFP36L2P47974 494 aaKnown RBP9.6□□□□□ -0.87
SS18-221ENST00000582448 HNRNPFP52597 415 aaKnown RBP9.6□□□□□ -0.87
SS18-221ENST00000582448 ARFIP1P53367 373 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 MAPK12P53778 367 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 SESN3P58005 492 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 STXBP1P61764 594 aaKnown RBP9.6□□□□□ -0.87
SS18-221ENST00000582448 ACY1Q03154 408 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 LIPEQ05469 1076 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 CCNIQ14094 377 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 HEPACAMQ14CZ8 416 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 SLC5A12Q1EHB4 618 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 HKDC1Q2TB90 917 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 FAM69BQ5VUD6 431 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 GTF2IRD2BQ6EKJ0 949 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 ADNP2Q6IQ32 1131 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 PRSS42Q7Z5A4 293 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 GTF2IRD2Q86UP8 949 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 TMEM126BQ8IUX1 230 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 RIMKLAQ8IXN7 391 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 SLC15A3Q8IY34 581 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 CISD2Q8N5K1 135 aaKnown RBP9.6□□□□□ -0.87
SS18-221ENST00000582448 Q8NA96 180 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 OR8J2Q8NGG1 315 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 GTF2H4Q92759 462 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 POP5Q969H6 163 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms