RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 LYARQ9NX58 379 aaKnown RBP11.52□□□□□ -0.57
SS18-219ENST00000581570 CD274Q9NZQ7 290 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 KLRF1Q9NZS2 232 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 CHMP2BQ9UQN3 213 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.51□□□□□ -0.57
SS18-219ENST00000581570 A0A1W2PS29 197 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 SLC22A20A6NK97 555 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 DNALI1O14645 258 aaPredicted RBP11.51□□□□□ -0.57
SS18-219ENST00000581570 EEDO75530 441 aaKnown RBP11.51□□□□□ -0.57
SS18-219ENST00000581570 PLAUP00749 431 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 FAM58BPP0C7Q3 252 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 EPB42P16452 691 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 TBXA2RP21731 343 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 GPX3P22352 226 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 SRD5A2P31213 254 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 GMPRP36959 345 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 ELK3P41970 407 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 SLC12A2P55011 1212 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 NNATQ16517 81 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 CHRFAM7AQ494W8 412 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 CYP20A1Q6UW02 462 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 LRRC70Q7Z2Q7 622 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 ZNF611Q8N823 705 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 ZNF610Q8N9Z0 462 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 PDPRQ8NCN5 879 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 OR7G1Q8NGA0 311 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 HUS1BQ8NHY5 278 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 GRK7Q8WTQ7 553 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 CAVIN3Q969G5 261 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 OMA1Q96E52 524 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 MS4A14Q96JA4 679 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 CD244Q9BZW8 370 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 KLHL4Q9C0H6 718 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 POPDC3Q9HBV1 291 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 LZTFL1Q9NQ48 299 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 HEY2Q9UBP5 337 aa11.51□□□□□ -0.57
SS18-219ENST00000581570 MXRA5Q9NR99 2828 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 A0A0A6YYD5 115 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 PRAMEF25A6NGN4 478 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 FRG2CA6NGY1 282 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 HS3ST1O14792 307 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 PGRMC2O15173 223 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 EMC8O43402 210 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 KLF4O43474 513 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 TMPRSS11DO60235 418 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 AIFM1O95831 613 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 CGAP01215 116 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 S100BP04271 92 aaPredicted RBP11.5□□□□□ -0.57
SS18-219ENST00000581570 THBDP07204 575 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 CD8BP10966 210 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 NT5EP21589 574 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 CNTFP26441 200 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 PIK3R1P27986 724 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 IDUAP35475 653 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 ARFIP1P53367 373 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 RPS4XP62701 263 aaKnown RBP11.5□□□□□ -0.57
SS18-219ENST00000581570 MGAT5Q09328 741 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 PLCXD2Q0VAA5 305 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 PPP1R7Q15435 360 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 OR4D1Q15615 310 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 BCL2A1Q16548 175 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 C6orf163Q5TEZ5 329 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 STEAP4Q687X5 459 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 OR52E8Q6IFG1 317 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 PLCZ1Q86YW0 608 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 TRIM58Q8NG06 486 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 FIG4Q92562 907 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 REPS1Q96D71 796 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 DTNBP1Q96EV8 351 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 MTERF1Q99551 399 aaKnown RBP11.5□□□□□ -0.57
SS18-219ENST00000581570 DDX31Q9H8H2 851 aaKnown RBP11.5□□□□□ -0.57
SS18-219ENST00000581570 PSD3Q9NYI0 1048 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 LAMP3Q9UQV4 416 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 DTX4Q9Y2E6 619 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 CUBNO60494 3623 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 MED12Q93074 2177 aa11.5□□□□□ -0.57
SS18-219ENST00000581570 RAI1Q7Z5J4 1906 aaPredicted RBP11.49□□□□□ -0.57
SS18-219ENST00000581570 UGT2B11O75310 529 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 CCDC166P0CW27 439 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 CD1DP15813 335 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 TCEA1P23193 301 aaKnown RBP11.49□□□□□ -0.57
SS18-219ENST00000581570 PTX3P26022 381 aaPredicted RBP11.49□□□□□ -0.57
SS18-219ENST00000581570 BSGP35613 385 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 PIK3CBP42338 1070 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 XKP51811 444 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 FGFBP1Q14512 234 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 ETFDHQ16134 617 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 GRHL2Q6ISB3 625 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 MILR1Q7Z6M3 343 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 UBQLNLQ8IYU4 475 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 PDIK1LQ8N165 341 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 OR4K14Q8NGD5 310 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 EXT2Q93063 718 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 ZBED6CLQ96FA7 236 aaPredicted RBP11.49□□□□□ -0.57
SS18-219ENST00000581570 TRMT61AQ96FX7 289 aaKnown RBP11.49□□□□□ -0.57
SS18-219ENST00000581570 LCORQ96JN0 433 aaPredicted RBP11.49□□□□□ -0.57
SS18-219ENST00000581570 ZNF717Q9BY31 904 aaPredicted RBP11.49□□□□□ -0.57
SS18-219ENST00000581570 RHOJQ9H4E5 214 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 EHD3Q9NZN3 535 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 ASIC3Q9UHC3 531 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms