RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 LRRC39Q96DD0 335 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 OMA1Q96E52 524 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 PGM2Q96G03 612 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 DCUN1D1Q96GG9 259 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ZC3HAV1LQ96H79 300 aaKnown RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 REXO5Q96IC2 774 aaKnown RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 MARK4Q96L34 752 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 CMTM3Q96MX0 182 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SPATA13Q96N96 652 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 TRIB3Q96RU7 358 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 KRT12Q99456 494 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SLC29A1Q99808 456 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 PKP2Q99959 881 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 PSD2Q9BQI7 771 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 MED18Q9BUE0 208 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 TMEM109Q9BVC6 243 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ROPN1BQ9BZX4 212 aaPredicted RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 RAB17Q9H0T7 212 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 OR51B5Q9H339 312 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 CCDC134Q9H6E4 229 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 MARCH7Q9H992 704 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 COG4Q9H9E3 785 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ROPN1Q9HAT0 212 aaPredicted RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 IL1RL2Q9HB29 575 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 PLGRKTQ9HBL7 147 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 EML4Q9HC35 981 aaKnown RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 INIPQ9NRY2 104 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 PARVAQ9NVD7 372 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 HAUS2Q9NVX0 235 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 NMRK1Q9NWW6 199 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 PTTG2Q9NZH5 202 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ZIM2Q9NZV7 527 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ADAM22Q9P0K1 906 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SPRR3Q9UBC9 169 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 STOML1Q9UBI4 398 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 FAM153AQ9UHL3 310 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 METRNQ9UJH8 293 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SLC12A4Q9UP95 1085 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ERVK-19Q9WJR5 959 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 LIPT1Q9Y234 373 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 LRCH1Q9Y2L9 728 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 IFT52Q9Y366 437 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 UTP11Q9Y3A2 253 aaKnown RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 CHTOPQ9Y3Y2 248 aaKnown RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 LRRC42Q9Y546 428 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 NOX1Q9Y5S8 564 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SCN3AQ9NY46 2000 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SACSQ9NZJ4 4579 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 A0A088AWK7 358 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 A0A0A6YYK5 440 aaPredicted RBP2.21□□□□□ -2.06
SNORD53-201ENST00000579969 A0A0G2JMM0 328 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.21□□□□□ -2.06
SNORD53-201ENST00000579969 A0A1B0GWJ7 208 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 A0A1W2PPB8 328 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 A0A1W2PRS3 328 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 SH3PXD2BA1X283 911 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 FAM172BPA6NC97 362 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 MBD3L3A6NE82 208 aaPredicted RBP2.21□□□□□ -2.06
SNORD53-201ENST00000579969 FAM187AA6NFU0 413 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 FRG2CA6NGY1 282 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 CD8B2A6NJW9 211 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 ELOA3DA6NLF2 546 aaPredicted RBP2.21□□□□□ -2.06
SNORD53-201ENST00000579969 KIR3DP1A8MWS1 328 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 EVPLLA8MZ36 301 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 FAM25AB3EWG3 89 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 FAM25CB3EWG5 89 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 FAM25GB3EWG6 89 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 E9PBE3 544 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 F8W8V4 182 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 H0YIG0 161 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 H0YIV9 168 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 H7C0C1 242 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 TRIM77I1YAP6 450 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 NDUFS8O00217 210 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 PGRMC1O00264 195 aaKnown RBP2.21□□□□□ -2.06
SNORD53-201ENST00000579969 BET1O15155 118 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 EPHB6O15197 1021 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 RGS16O15492 202 aaPredicted RBP2.21□□□□□ -2.06
SNORD53-201ENST00000579969 KLF4O43474 513 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 RAD51CO43502 376 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 BUD23O43709 281 aaKnown RBP2.21□□□□□ -2.06
SNORD53-201ENST00000579969 B4GALT2O60909 372 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 CLN5O75503 358 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 KCNH1O95259 989 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 HSPA4LO95757 839 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 NDST3O95803 873 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 S1PR4O95977 384 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 TGFAP01135 160 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 HLA-DQB2P05538 268 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 THBS1P07996 1170 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 ABCB1P08183 1280 aaPredicted RBP2.21□□□□□ -2.06
SNORD53-201ENST00000579969 SOD3P08294 240 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 KRT16P08779 473 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 QDPRP09417 244 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 NUDT17P0C025 328 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 FAM228BP0C875 321 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 OCM2P0CE71 109 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 OCMP0CE72 109 aaPredicted RBP2.21□□□□□ -2.06
SNORD53-201ENST00000579969 ARAFP10398 606 aa2.21□□□□□ -2.06
SNORD53-201ENST00000579969 PRG2P13727 222 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms